diff options
| author | Thomas White <taw@physics.org> | 2013-11-19 17:44:48 +0100 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2013-11-23 02:52:51 -0800 |
| commit | 46a290bfc8de65bef253f8516e13b3ca09698caa (patch) | |
| tree | 34a89c391945ecba735532bf060096fc1dec9c29 | |
| parent | 6bea65d5b69abf1ee5cffc13d9757a1c1f041078 (diff) | |
Move debugging output
| -rw-r--r-- | libcrystfel/src/integration.c | 13 |
1 files changed, 7 insertions, 6 deletions
diff --git a/libcrystfel/src/integration.c b/libcrystfel/src/integration.c index 7046e109..a118384a 100644 --- a/libcrystfel/src/integration.c +++ b/libcrystfel/src/integration.c @@ -1564,12 +1564,6 @@ static void integrate_rings_once(Reflection *refl, struct image *image, intensity = tentative_intensity(ic, bx); mean_var_area(ic, bx, BM_BG, &bgmean, &sig2_bg); - mean_var_area(ic, bx, BM_PK, &pkmean, &sig2_pk); - if ( bx->verbose ) { - STATUS("bg mean, var = %.2f, %.2f\n", bgmean, sig2_bg); - STATUS("pk mean, var = %.2f, %.2f\n", pkmean, sig2_pk); - } - aduph = bx->p->adu_per_eV * ph_lambda_to_eV(ic->image->lambda); sig2_poisson = aduph * intensity; @@ -1595,6 +1589,13 @@ static void integrate_rings_once(Reflection *refl, struct image *image, sigma = sqrt(sig2_poisson + bx->m*sig2_bg); + mean_var_area(ic, bx, BM_PK, &pkmean, &sig2_pk); + if ( bx->verbose ) { + STATUS("bg mean, var = %.2f, %.2f\n", bgmean, sig2_bg); + STATUS("pk mean, var = %.2f, %.2f\n", pkmean, sig2_pk); + STATUS("intensity = %.2f +/- %.2f\n", intensity, sigma); + } + if ( intensity < -5.0*sigma ) { delete_box(ic, bx); ic->n_implausible++; |