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| author | Thomas White <taw@physics.org> | 2019-04-26 17:21:05 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2019-09-12 16:35:52 +0200 |
| commit | 7f5a04465249744d4ba1d0a9f50c350ec7aaaab2 (patch) | |
| tree | 1efe996795b5aba6d8d4dd14802015b0f8bffcfb | |
| parent | fa5d0f9561642e7dd5edc94297b313cf6e55b35b (diff) | |
Format help items for pinkIndexer
| -rw-r--r-- | src/indexamajig.c | 50 |
1 files changed, 24 insertions, 26 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c index da5c3f7e..9aef3f2e 100644 --- a/src/indexamajig.c +++ b/src/indexamajig.c @@ -204,32 +204,30 @@ static void show_help(const char *s) " All peaks are used for refinement.\n" " Default: 250\n" "\n" -" --pinkIndexer-considered-peaks-count Considered peaks count selector \n" -" [0-4] (veryFew to manyMany)\n" -" Default is 4 (manyMany)\n" -" --pinkIndexer-angle-resolution Angle resolution selector \n" -" [0-4] (extremelyLoose to extremelyDense)\n" -" Default is 2 (normal)\n" -" --pinkIndexer-refinement-type Refinement type \n" -" Default is 1\n" -" 0 = none\n" -" 1 = fixedLatticeParameters\n" -" 2 = variableLatticeParameters\n" -" 3 = firstFixedThenVariableLatticeParameters\n" -" 4 = firstFixedThenVariableLatticeParametersMultiSeed\n" -" 5 = firstFixedThenVariableLatticeParametersCenterAdjustmentMultiSeed\n" -" --pinkIndexer-tolerance Relative tolerance of the lattice vectors.\n" -" Default is 0.06\n" -" --pinkIndexer-reflection-radius radius of the reflections in reciprocal space in 1/A.\n" -" Default is 2%% of a*.\n" -" Should be chosen ~0.002 for electrons.\n" -" --pinkIndexer-max-resolution-for-indexing Measured in 1/A\n" -" --pinkIndexer-multi Use pinkIndexers own multi indexing.\n" -" --pinkIndexer-thread-count thread count for internal parallelization \n" -" Default is 1\n" -" --pinkIndexer-no-check-indexed Leave the check whether a pattern is indexed completely to CrystFEL\n" -" useful for monochromatic and tweaking." -"\n" +" --pinkIndexer-considered-peaks-count\n" +" Considered peaks count, 0 (fewest) to 4 (most)\n" +" Default: 4\n" +" --pinkIndexer-angle-resolution\n" +" Angle resolution, 0 (loosest) to 4 (most dense)\n" +" Default: 2\n" +" --pinkIndexer-refinement-type\n" +" Refinement type, 0 (none) to 5 (most accurate)\n" +" Default: 1\n" +" --pinkIndexer-tolerance\n" +" Relative tolerance of the lattice vectors.\n" +" Default 0.06\n" +" --pinkIndexer-reflection-radius\n" +" Radius of the reflections in reciprocal space.\n" +" Specified in 1/A. Default is 2%% of a*.\n" +" --pinkIndexer-max-resolution-for-indexing\n" +" Measured in 1/A\n" +" --pinkIndexer-multi Use pinkIndexers own multi indexing.\n" +" --pinkIndexer-thread-count\n" +" Thread count for internal parallelization \n" +" Default: 1\n" +" --pinkIndexer-no-check-indexed\n" +" Disable internal check for correct indexing\n" +" solutions\n" "\nIntegration options:\n\n" " --integration=<meth> Integration method (rings,prof2d)-(cen,nocen)\n" " Default: rings-nocen\n" |