Use non-recursive make, as far as possible

1 files changed, 718 insertions, 29 deletions

diff --git a/Makefile.in b/Makefile.in
index 0c556938..467a2308 100644
--- a/Makefile.in
+++ b/Makefile.in
@@ -14,6 +14,8 @@
 # PARTICULAR PURPOSE.
 
 @SET_MAKE@
+
+
 VPATH = @srcdir@
 pkgdatadir = $(datadir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
@@ -33,13 +35,23 @@ PRE_UNINSTALL = :
 POST_UNINSTALL = :
 build_triplet = @build@
 host_triplet = @host@
+bin_PROGRAMS = src/pattern_sim$(EXEEXT) src/process_hkl$(EXEEXT) \
+	src/get_hkl$(EXEEXT) src/indexamajig$(EXEEXT) \
+	src/compare_hkl$(EXEEXT) src/powder_plot$(EXEEXT) \
+	src/render_hkl$(EXEEXT) src/calibrate_detector$(EXEEXT) \
+	src/facetron$(EXEEXT) src/reintegrate$(EXEEXT) \
+	src/estimate_background$(EXEEXT) src/check_hkl$(EXEEXT) \
+	$(am__EXEEXT_1) $(am__EXEEXT_2)
+@HAVE_GTK_TRUE@am__append_1 = src/hdfsee
+@HAVE_CAIRO_TRUE@am__append_2 = src/cubeit
+@HAVE_OPENCL_TRUE@am__append_3 = src/diffraction-gpu.c src/cl-utils.c
+@HAVE_OPENCL_TRUE@am__append_4 = src/diffraction-gpu.c src/cl-utils.c
 subdir = .
 DIST_COMMON = README $(am__configure_deps) $(srcdir)/Makefile.am \
 	$(srcdir)/Makefile.in $(srcdir)/config.h.in \
 	$(top_srcdir)/configure AUTHORS COPYING ChangeLog INSTALL NEWS \
-	build-aux/config.guess build-aux/config.sub build-aux/depcomp \
-	build-aux/install-sh build-aux/missing config.guess config.sub \
-	depcomp install-sh missing
+	build-aux/compile build-aux/config.guess build-aux/config.sub \
+	build-aux/depcomp build-aux/install-sh build-aux/missing
 ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
 am__aclocal_m4_deps = $(top_srcdir)/m4/00gnulib.m4 \
 	$(top_srcdir)/m4/extensions.m4 \
@@ -59,14 +71,186 @@ mkinstalldirs = $(install_sh) -d
 CONFIG_HEADER = config.h
 CONFIG_CLEAN_FILES =
 CONFIG_CLEAN_VPATH_FILES =
-AM_V_GEN = $(am__v_GEN_$(V))
-am__v_GEN_ = $(am__v_GEN_$(AM_DEFAULT_VERBOSITY))
-am__v_GEN_0 = @echo "  GEN   " $@;
+@HAVE_GTK_TRUE@am__EXEEXT_1 = src/hdfsee$(EXEEXT)
+@HAVE_CAIRO_TRUE@am__EXEEXT_2 = src/cubeit$(EXEEXT)
+am__installdirs = "$(DESTDIR)$(bindir)" "$(DESTDIR)$(crystfeldir)" \
+	"$(DESTDIR)$(crystfeldocdir)" "$(DESTDIR)$(hdfseedir)" \
+	"$(DESTDIR)$(scriptdir)"
+PROGRAMS = $(bin_PROGRAMS)
+am__dirstamp = $(am__leading_dot)dirstamp
+am_src_calibrate_detector_OBJECTS = src/calibrate_detector.$(OBJEXT) \
+	src/utils.$(OBJEXT) src/hdf5-file.$(OBJEXT) \
+	src/image.$(OBJEXT) src/filters.$(OBJEXT) src/peaks.$(OBJEXT) \
+	src/detector.$(OBJEXT) src/cell.$(OBJEXT) \
+	src/thread-pool.$(OBJEXT)
+src_calibrate_detector_OBJECTS = $(am_src_calibrate_detector_OBJECTS)
+src_calibrate_detector_LDADD = $(LDADD)
+src_calibrate_detector_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_check_hkl_OBJECTS = src/check_hkl.$(OBJEXT) src/sfac.$(OBJEXT) \
+	src/cell.$(OBJEXT) src/utils.$(OBJEXT) \
+	src/reflections.$(OBJEXT) src/statistics.$(OBJEXT) \
+	src/symmetry.$(OBJEXT)
+src_check_hkl_OBJECTS = $(am_src_check_hkl_OBJECTS)
+src_check_hkl_LDADD = $(LDADD)
+src_check_hkl_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_compare_hkl_OBJECTS = src/compare_hkl.$(OBJEXT) \
+	src/sfac.$(OBJEXT) src/cell.$(OBJEXT) src/utils.$(OBJEXT) \
+	src/reflections.$(OBJEXT) src/statistics.$(OBJEXT) \
+	src/symmetry.$(OBJEXT)
+src_compare_hkl_OBJECTS = $(am_src_compare_hkl_OBJECTS)
+src_compare_hkl_LDADD = $(LDADD)
+src_compare_hkl_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am__src_cubeit_SOURCES_DIST = src/cubeit.c src/cell.c src/hdf5-file.c \
+	src/utils.c src/detector.c src/render.c src/filters.c \
+	src/image.c src/symmetry.c src/stream.c src/thread-pool.c
+@HAVE_CAIRO_TRUE@am_src_cubeit_OBJECTS = src/cubeit.$(OBJEXT) \
+@HAVE_CAIRO_TRUE@	src/cell.$(OBJEXT) src/hdf5-file.$(OBJEXT) \
+@HAVE_CAIRO_TRUE@	src/utils.$(OBJEXT) src/detector.$(OBJEXT) \
+@HAVE_CAIRO_TRUE@	src/render.$(OBJEXT) src/filters.$(OBJEXT) \
+@HAVE_CAIRO_TRUE@	src/image.$(OBJEXT) src/symmetry.$(OBJEXT) \
+@HAVE_CAIRO_TRUE@	src/stream.$(OBJEXT) \
+@HAVE_CAIRO_TRUE@	src/thread-pool.$(OBJEXT)
+src_cubeit_OBJECTS = $(am_src_cubeit_OBJECTS)
+src_cubeit_LDADD = $(LDADD)
+src_cubeit_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_estimate_background_OBJECTS =  \
+	src/estimate_background.$(OBJEXT) src/stream.$(OBJEXT) \
+	src/utils.$(OBJEXT) src/cell.$(OBJEXT)
+src_estimate_background_OBJECTS =  \
+	$(am_src_estimate_background_OBJECTS)
+src_estimate_background_LDADD = $(LDADD)
+src_estimate_background_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_facetron_OBJECTS = src/facetron.$(OBJEXT) src/cell.$(OBJEXT) \
+	src/hdf5-file.$(OBJEXT) src/utils.$(OBJEXT) \
+	src/detector.$(OBJEXT) src/peaks.$(OBJEXT) src/image.$(OBJEXT) \
+	src/geometry.$(OBJEXT) src/reflections.$(OBJEXT) \
+	src/stream.$(OBJEXT) src/thread-pool.$(OBJEXT) \
+	src/beam-parameters.$(OBJEXT) src/symmetry.$(OBJEXT) \
+	src/post-refinement.$(OBJEXT) src/hrs-scaling.$(OBJEXT)
+src_facetron_OBJECTS = $(am_src_facetron_OBJECTS)
+src_facetron_LDADD = $(LDADD)
+src_facetron_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_get_hkl_OBJECTS = src/get_hkl.$(OBJEXT) src/sfac.$(OBJEXT) \
+	src/cell.$(OBJEXT) src/utils.$(OBJEXT) \
+	src/reflections.$(OBJEXT) src/symmetry.$(OBJEXT) \
+	src/beam-parameters.$(OBJEXT)
+src_get_hkl_OBJECTS = $(am_src_get_hkl_OBJECTS)
+src_get_hkl_LDADD = $(LDADD)
+src_get_hkl_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am__src_hdfsee_SOURCES_DIST = src/hdfsee.c src/displaywindow.c \
+	src/render.c src/hdf5-file.c src/utils.c src/image.c \
+	src/filters.c
+@HAVE_GTK_TRUE@am_src_hdfsee_OBJECTS = src/hdfsee.$(OBJEXT) \
+@HAVE_GTK_TRUE@	src/displaywindow.$(OBJEXT) \
+@HAVE_GTK_TRUE@	src/render.$(OBJEXT) src/hdf5-file.$(OBJEXT) \
+@HAVE_GTK_TRUE@	src/utils.$(OBJEXT) src/image.$(OBJEXT) \
+@HAVE_GTK_TRUE@	src/filters.$(OBJEXT)
+src_hdfsee_OBJECTS = $(am_src_hdfsee_OBJECTS)
+src_hdfsee_LDADD = $(LDADD)
+src_hdfsee_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am__src_indexamajig_SOURCES_DIST = src/indexamajig.c src/hdf5-file.c \
+	src/utils.c src/cell.c src/image.c src/peaks.c src/index.c \
+	src/filters.c src/diffraction.c src/detector.c src/sfac.c \
+	src/dirax.c src/mosflm.c src/reflections.c src/templates.c \
+	src/symmetry.c src/geometry.c src/thread-pool.c \
+	src/beam-parameters.c src/diffraction-gpu.c src/cl-utils.c
+@HAVE_OPENCL_TRUE@am__objects_1 = src/diffraction-gpu.$(OBJEXT) \
+@HAVE_OPENCL_TRUE@	src/cl-utils.$(OBJEXT)
+am_src_indexamajig_OBJECTS = src/indexamajig.$(OBJEXT) \
+	src/hdf5-file.$(OBJEXT) src/utils.$(OBJEXT) src/cell.$(OBJEXT) \
+	src/image.$(OBJEXT) src/peaks.$(OBJEXT) src/index.$(OBJEXT) \
+	src/filters.$(OBJEXT) src/diffraction.$(OBJEXT) \
+	src/detector.$(OBJEXT) src/sfac.$(OBJEXT) src/dirax.$(OBJEXT) \
+	src/mosflm.$(OBJEXT) src/reflections.$(OBJEXT) \
+	src/templates.$(OBJEXT) src/symmetry.$(OBJEXT) \
+	src/geometry.$(OBJEXT) src/thread-pool.$(OBJEXT) \
+	src/beam-parameters.$(OBJEXT) $(am__objects_1)
+src_indexamajig_OBJECTS = $(am_src_indexamajig_OBJECTS)
+src_indexamajig_LDADD = $(LDADD)
+src_indexamajig_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am__src_pattern_sim_SOURCES_DIST = src/pattern_sim.c src/diffraction.c \
+	src/utils.c src/image.c src/cell.c src/hdf5-file.c \
+	src/detector.c src/sfac.c src/peaks.c src/reflections.c \
+	src/beam-parameters.c src/symmetry.c src/diffraction-gpu.c \
+	src/cl-utils.c
+am_src_pattern_sim_OBJECTS = src/pattern_sim.$(OBJEXT) \
+	src/diffraction.$(OBJEXT) src/utils.$(OBJEXT) \
+	src/image.$(OBJEXT) src/cell.$(OBJEXT) src/hdf5-file.$(OBJEXT) \
+	src/detector.$(OBJEXT) src/sfac.$(OBJEXT) src/peaks.$(OBJEXT) \
+	src/reflections.$(OBJEXT) src/beam-parameters.$(OBJEXT) \
+	src/symmetry.$(OBJEXT) $(am__objects_1)
+src_pattern_sim_OBJECTS = $(am_src_pattern_sim_OBJECTS)
+src_pattern_sim_LDADD = $(LDADD)
+src_pattern_sim_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_powder_plot_OBJECTS = src/powder_plot.$(OBJEXT) \
+	src/cell.$(OBJEXT) src/utils.$(OBJEXT) src/image.$(OBJEXT) \
+	src/hdf5-file.$(OBJEXT) src/detector.$(OBJEXT)
+src_powder_plot_OBJECTS = $(am_src_powder_plot_OBJECTS)
+src_powder_plot_LDADD = $(LDADD)
+src_powder_plot_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_process_hkl_OBJECTS = src/process_hkl.$(OBJEXT) \
+	src/sfac.$(OBJEXT) src/statistics.$(OBJEXT) src/cell.$(OBJEXT) \
+	src/utils.$(OBJEXT) src/reflections.$(OBJEXT) \
+	src/symmetry.$(OBJEXT) src/stream.$(OBJEXT) \
+	src/beam-parameters.$(OBJEXT)
+src_process_hkl_OBJECTS = $(am_src_process_hkl_OBJECTS)
+src_process_hkl_LDADD = $(LDADD)
+src_process_hkl_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_reintegrate_OBJECTS = src/reintegrate.$(OBJEXT) \
+	src/cell.$(OBJEXT) src/hdf5-file.$(OBJEXT) src/utils.$(OBJEXT) \
+	src/detector.$(OBJEXT) src/peaks.$(OBJEXT) src/image.$(OBJEXT) \
+	src/stream.$(OBJEXT) src/index.$(OBJEXT) src/dirax.$(OBJEXT) \
+	src/mosflm.$(OBJEXT) src/templates.$(OBJEXT) \
+	src/geometry.$(OBJEXT) src/symmetry.$(OBJEXT) \
+	src/thread-pool.$(OBJEXT)
+src_reintegrate_OBJECTS = $(am_src_reintegrate_OBJECTS)
+src_reintegrate_LDADD = $(LDADD)
+src_reintegrate_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+am_src_render_hkl_OBJECTS = src/render_hkl.$(OBJEXT) \
+	src/cell.$(OBJEXT) src/reflections.$(OBJEXT) \
+	src/utils.$(OBJEXT) src/povray.$(OBJEXT) \
+	src/symmetry.$(OBJEXT) src/render.$(OBJEXT) \
+	src/hdf5-file.$(OBJEXT) src/image.$(OBJEXT) \
+	src/filters.$(OBJEXT)
+src_render_hkl_OBJECTS = $(am_src_render_hkl_OBJECTS)
+src_render_hkl_LDADD = $(LDADD)
+src_render_hkl_DEPENDENCIES = $(top_builddir)/lib/libgnu.a
+DEFAULT_INCLUDES = -I.@am__isrc@
+depcomp = $(SHELL) $(top_srcdir)/build-aux/depcomp
+am__depfiles_maybe = depfiles
+am__mv = mv -f
+COMPILE = $(CC) $(DEFS) $(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) \
+	$(CPPFLAGS) $(AM_CFLAGS) $(CFLAGS)
+AM_V_CC = $(am__v_CC_$(V))
+am__v_CC_ = $(am__v_CC_$(AM_DEFAULT_VERBOSITY))
+am__v_CC_0 = @echo "  CC    " $@;
 AM_V_at = $(am__v_at_$(V))
 am__v_at_ = $(am__v_at_$(AM_DEFAULT_VERBOSITY))
 am__v_at_0 = @
-SOURCES =
-DIST_SOURCES =
+CCLD = $(CC)
+LINK = $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) $(LDFLAGS) -o $@
+AM_V_CCLD = $(am__v_CCLD_$(V))
+am__v_CCLD_ = $(am__v_CCLD_$(AM_DEFAULT_VERBOSITY))
+am__v_CCLD_0 = @echo "  CCLD  " $@;
+AM_V_GEN = $(am__v_GEN_$(V))
+am__v_GEN_ = $(am__v_GEN_$(AM_DEFAULT_VERBOSITY))
+am__v_GEN_0 = @echo "  GEN   " $@;
+SOURCES = $(src_calibrate_detector_SOURCES) $(src_check_hkl_SOURCES) \
+	$(src_compare_hkl_SOURCES) $(src_cubeit_SOURCES) \
+	$(src_estimate_background_SOURCES) $(src_facetron_SOURCES) \
+	$(src_get_hkl_SOURCES) $(src_hdfsee_SOURCES) \
+	$(src_indexamajig_SOURCES) $(src_pattern_sim_SOURCES) \
+	$(src_powder_plot_SOURCES) $(src_process_hkl_SOURCES) \
+	$(src_reintegrate_SOURCES) $(src_render_hkl_SOURCES)
+DIST_SOURCES = $(src_calibrate_detector_SOURCES) \
+	$(src_check_hkl_SOURCES) $(src_compare_hkl_SOURCES) \
+	$(am__src_cubeit_SOURCES_DIST) \
+	$(src_estimate_background_SOURCES) $(src_facetron_SOURCES) \
+	$(src_get_hkl_SOURCES) $(am__src_hdfsee_SOURCES_DIST) \
+	$(am__src_indexamajig_SOURCES_DIST) \
+	$(am__src_pattern_sim_SOURCES_DIST) $(src_powder_plot_SOURCES) \
+	$(src_process_hkl_SOURCES) $(src_reintegrate_SOURCES) \
+	$(src_render_hkl_SOURCES)
 RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
 	html-recursive info-recursive install-data-recursive \
 	install-dvi-recursive install-exec-recursive \
@@ -74,6 +258,29 @@ RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
 	install-pdf-recursive install-ps-recursive install-recursive \
 	installcheck-recursive installdirs-recursive pdf-recursive \
 	ps-recursive uninstall-recursive
+am__vpath_adj_setup = srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`;
+am__vpath_adj = case $$p in \
+    $(srcdir)/*) f=`echo "$$p" | sed "s|^$$srcdirstrip/||"`;; \
+    *) f=$$p;; \
+  esac;
+am__strip_dir = f=`echo $$p | sed -e 's|^.*/||'`;
+am__install_max = 40
+am__nobase_strip_setup = \
+  srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*|]/\\\\&/g'`
+am__nobase_strip = \
+  for p in $$list; do echo "$$p"; done | sed -e "s|$$srcdirstrip/||"
+am__nobase_list = $(am__nobase_strip_setup); \
+  for p in $$list; do echo "$$p $$p"; done | \
+  sed "s| $$srcdirstrip/| |;"' / .*\//!s/ .*/ ./; s,\( .*\)/[^/]*$$,\1,' | \
+  $(AWK) 'BEGIN { files["."] = "" } { files[$$2] = files[$$2] " " $$1; \
+    if (++n[$$2] == $(am__install_max)) \
+      { print $$2, files[$$2]; n[$$2] = 0; files[$$2] = "" } } \
+    END { for (dir in files) print dir, files[dir] }'
+am__base_list = \
+  sed '$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;$$!N;s/\n/ /g' | \
+  sed '$$!N;$$!N;$$!N;$$!N;s/\n/ /g'
+DATA = $(crystfel_DATA) $(crystfeldoc_DATA) $(hdfsee_DATA) \
+	$(script_DATA)
 RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive	\
   distclean-recursive maintainer-clean-recursive
 AM_RECURSIVE_TARGETS = $(RECURSIVE_TARGETS:-recursive=) \
@@ -308,13 +515,131 @@ target_alias = @target_alias@
 top_build_prefix = @top_build_prefix@
 top_builddir = @top_builddir@
 top_srcdir = @top_srcdir@
-EXTRA_DIST = configure m4/gnulib-cache.m4
-SUBDIRS = lib src data doc doc/examples scripts
+EXTRA_DIST = configure m4/gnulib-cache.m4 src/cell.h src/hdf5-file.h \
+	src/image.h src/utils.h src/diffraction.h src/detector.h \
+	src/sfac.h src/reflections.h src/list_tmp.h src/statistics.h \
+	src/displaywindow.h src/render.h src/hdfsee.h src/dirax.h \
+	src/mosflm.h src/peaks.h src/index.h src/filters.h \
+	src/diffraction-gpu.h src/cl-utils.h src/symmetry.h \
+	src/povray.h src/index-priv.h src/geometry.h src/templates.h \
+	src/render_hkl.h src/stream.h src/thread-pool.h \
+	src/beam-parameters.h src/post-refinement.h src/hrs-scaling.h \
+	data/sfac/Ca.nff data/sfac/C.nff data/sfac/Fe.nff \
+	data/sfac/H.nff data/sfac/Mg.nff data/sfac/N.nff \
+	data/sfac/O.nff data/sfac/P.nff data/sfac/S.nff \
+	data/sfac/f0_WaasKirf.dat data/defs.h data/diffraction.cl \
+	data/displaywindow.ui doc/geometry.txt doc/indexamajig.txt \
+	doc/pattern_sim.txt doc/process_hkl.txt doc/symmetry.txt \
+	doc/twin-calculator.pdf doc/0-INDEX doc/examples/lcls-dec.geom \
+	doc/examples/lcls-june-r0013-r0128.geom \
+	doc/examples/lcls-xpp-estimate.geom doc/examples/simple.geom \
+	scripts/check-near-bragg scripts/double-hit \
+	scripts/random-image scripts/stream-split scripts/wibbletron \
+	scripts/zone-axis scripts/create-mtz scripts/frequency \
+	scripts/i0-analysis scripts/mtz2hkl scripts/sequence-image \
+	scripts/test-facetron scripts/zone-axes \
+	scripts/alternate-stream scripts/README scripts/indexing-rate \
+	scripts/observed-peak-rate scripts/cell-please \
+	scripts/check-hkl-completeness.gp scripts/check-hkl-quality.gp \
+	scripts/compare-hkl.gp
+SUBDIRS = lib
 ACLOCAL_AMFLAGS = -I m4
+AM_CFLAGS = -Wall
+AM_CPPFLAGS = -DDATADIR=\""$(datadir)"\" -I$(top_builddir)/lib -I$(top_srcdir)/lib
+LDADD = $(top_builddir)/lib/libgnu.a
+src_pattern_sim_SOURCES = src/pattern_sim.c src/diffraction.c \
+	src/utils.c src/image.c src/cell.c src/hdf5-file.c \
+	src/detector.c src/sfac.c src/peaks.c src/reflections.c \
+	src/beam-parameters.c src/symmetry.c $(am__append_3)
+src_process_hkl_SOURCES = src/process_hkl.c src/sfac.c src/statistics.c src/cell.c \
+                      src/utils.c src/reflections.c src/symmetry.c \
+                      src/stream.c src/beam-parameters.c
+
+src_indexamajig_SOURCES = src/indexamajig.c src/hdf5-file.c \
+	src/utils.c src/cell.c src/image.c src/peaks.c src/index.c \
+	src/filters.c src/diffraction.c src/detector.c src/sfac.c \
+	src/dirax.c src/mosflm.c src/reflections.c src/templates.c \
+	src/symmetry.c src/geometry.c src/thread-pool.c \
+	src/beam-parameters.c $(am__append_4)
+@HAVE_GTK_TRUE@src_hdfsee_SOURCES = src/hdfsee.c src/displaywindow.c src/render.c src/hdf5-file.c \
+@HAVE_GTK_TRUE@                 src/utils.c src/image.c src/filters.c
+
+src_get_hkl_SOURCES = src/get_hkl.c src/sfac.c src/cell.c src/utils.c \
+                  src/reflections.c src/symmetry.c src/beam-parameters.c
+
+src_compare_hkl_SOURCES = src/compare_hkl.c src/sfac.c src/cell.c src/utils.c \
+                      src/reflections.c src/statistics.c src/symmetry.c
+
+src_check_hkl_SOURCES = src/check_hkl.c src/sfac.c src/cell.c src/utils.c \
+                    src/reflections.c src/statistics.c src/symmetry.c
+
+src_powder_plot_SOURCES = src/powder_plot.c src/cell.c src/utils.c src/image.c \
+                      src/hdf5-file.c src/detector.c
+
+src_render_hkl_SOURCES = src/render_hkl.c src/cell.c src/reflections.c src/utils.c \
+                     src/povray.c src/symmetry.c src/render.c src/hdf5-file.c \
+                     src/image.c src/filters.c
+
+src_calibrate_detector_SOURCES = src/calibrate_detector.c src/utils.c \
+                             src/hdf5-file.c src/image.c src/filters.c \
+                             src/peaks.c src/detector.c src/cell.c \
+                             src/thread-pool.c
+
+src_facetron_SOURCES = src/facetron.c src/cell.c src/hdf5-file.c src/utils.c \
+                   src/detector.c src/peaks.c src/image.c src/geometry.c \
+                   src/reflections.c src/stream.c src/thread-pool.c \
+                   src/beam-parameters.c src/symmetry.c src/post-refinement.c \
+                   src/hrs-scaling.c
+
+@HAVE_CAIRO_TRUE@src_cubeit_SOURCES = src/cubeit.c src/cell.c src/hdf5-file.c src/utils.c \
+@HAVE_CAIRO_TRUE@                 src/detector.c src/render.c src/filters.c src/image.c \
+@HAVE_CAIRO_TRUE@                 src/symmetry.c src/stream.c src/thread-pool.c
+
+src_reintegrate_SOURCES = src/reintegrate.c src/cell.c src/hdf5-file.c src/utils.c \
+                      src/detector.c src/peaks.c src/image.c src/stream.c \
+                      src/index.c src/dirax.c src/mosflm.c src/templates.c \
+                      src/geometry.c src/symmetry.c src/thread-pool.c
+
+src_estimate_background_SOURCES = src/estimate_background.c src/stream.c \
+                              src/utils.c src/cell.c
+
+INCLUDES = "-I$(top_srcdir)/data"
+hdfseedir = $(datadir)/hdfsee
+hdfsee_DATA = data/displaywindow.ui
+crystfeldir = $(datadir)/crystfel
+crystfel_DATA = data/diffraction.cl data/defs.h data/sfac/Ca.nff \
+                data/sfac/C.nff data/sfac/Fe.nff data/sfac/H.nff \
+                data/sfac/Mg.nff data/sfac/N.nff data/sfac/O.nff \
+                data/sfac/P.nff data/sfac/S.nff data/sfac/f0_WaasKirf.dat
+
+crystfeldocdir = $(docdir)
+crystfeldoc_DATA = doc/geometry.txt doc/indexamajig.txt doc/pattern_sim.txt \
+                   doc/process_hkl.txt doc/symmetry.txt \
+                   doc/twin-calculator.pdf \
+                   doc/0-INDEX doc/examples/lcls-dec.geom \
+                   doc/examples/lcls-dec.beam \
+                   doc/examples/lcls-june-r0013-r0128.geom \
+                   doc/examples/lcls-june.beam \
+                   doc/examples/lcls-xpp-estimate.geom \
+                   doc/examples/lcls-xpp-estimate.beam \
+                   doc/examples/simple.geom
+
+scriptdir = $(docdir)/scripts
+script_DATA = scripts/check-near-bragg scripts/double-hit \
+              scripts/random-image scripts/stream-split scripts/wibbletron \
+              scripts/zone-axis scripts/create-mtz scripts/frequency \
+              scripts/i0-analysis scripts/mtz2hkl scripts/sequence-image \
+              scripts/test-facetron scripts/zone-axes \
+              scripts/alternate-stream scripts/README scripts/indexing-rate \
+              scripts/observed-peak-rate scripts/cell-please \
+              scripts/check-hkl-completeness.gp scripts/check-hkl-quality.gp \
+              scripts/compare-hkl.gp
+
 all: config.h
 	$(MAKE) $(AM_MAKEFLAGS) all-recursive
 
 .SUFFIXES:
+.SUFFIXES: .c .o .obj
 am--refresh:
 	@:
 $(srcdir)/Makefile.in:  $(srcdir)/Makefile.am  $(am__configure_deps)
@@ -366,6 +691,353 @@ $(srcdir)/config.h.in:  $(am__configure_deps)
 
 distclean-hdr:
 	-rm -f config.h stamp-h1
+install-binPROGRAMS: $(bin_PROGRAMS)
+	@$(NORMAL_INSTALL)
+	test -z "$(bindir)" || $(MKDIR_P) "$(DESTDIR)$(bindir)"
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
+	for p in $$list; do echo "$$p $$p"; done | \
+	sed 's/$(EXEEXT)$$//' | \
+	while read p p1; do if test -f $$p; \
+	  then echo "$$p"; echo "$$p"; else :; fi; \
+	done | \
+	sed -e 'p;s,.*/,,;n;h' -e 's|.*|.|' \
+	    -e 'p;x;s,.*/,,;s/$(EXEEXT)$$//;$(transform);s/$$/$(EXEEXT)/' | \
+	sed 'N;N;N;s,\n, ,g' | \
+	$(AWK) 'BEGIN { files["."] = ""; dirs["."] = 1 } \
+	  { d=$$3; if (dirs[d] != 1) { print "d", d; dirs[d] = 1 } \
+	    if ($$2 == $$4) files[d] = files[d] " " $$1; \
+	    else { print "f", $$3 "/" $$4, $$1; } } \
+	  END { for (d in files) print "f", d, files[d] }' | \
+	while read type dir files; do \
+	    if test "$$dir" = .; then dir=; else dir=/$$dir; fi; \
+	    test -z "$$files" || { \
+	      echo " $(INSTALL_PROGRAM_ENV) $(INSTALL_PROGRAM) $$files '$(DESTDIR)$(bindir)$$dir'"; \
+	      $(INSTALL_PROGRAM_ENV) $(INSTALL_PROGRAM) $$files "$(DESTDIR)$(bindir)$$dir" || exit $$?; \
+	    } \
+	; done
+
+uninstall-binPROGRAMS:
+	@$(NORMAL_UNINSTALL)
+	@list='$(bin_PROGRAMS)'; test -n "$(bindir)" || list=; \
+	files=`for p in $$list; do echo "$$p"; done | \
+	  sed -e 'h;s,^.*/,,;s/$(EXEEXT)$$//;$(transform)' \
+	      -e 's/$$/$(EXEEXT)/' `; \
+	test -n "$$list" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(bindir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(bindir)" && rm -f $$files
+
+clean-binPROGRAMS:
+	-test -z "$(bin_PROGRAMS)" || rm -f $(bin_PROGRAMS)
+src/$(am__dirstamp):
+	@$(MKDIR_P) src
+	@: > src/$(am__dirstamp)
+src/$(DEPDIR)/$(am__dirstamp):
+	@$(MKDIR_P) src/$(DEPDIR)
+	@: > src/$(DEPDIR)/$(am__dirstamp)
+src/calibrate_detector.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/utils.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/hdf5-file.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/image.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/filters.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/peaks.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/detector.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/cell.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/thread-pool.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/calibrate_detector$(EXEEXT): $(src_calibrate_detector_OBJECTS) $(src_calibrate_detector_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/calibrate_detector$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_calibrate_detector_OBJECTS) $(src_calibrate_detector_LDADD) $(LIBS)
+src/check_hkl.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/sfac.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/reflections.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/statistics.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/symmetry.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/check_hkl$(EXEEXT): $(src_check_hkl_OBJECTS) $(src_check_hkl_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/check_hkl$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_check_hkl_OBJECTS) $(src_check_hkl_LDADD) $(LIBS)
+src/compare_hkl.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/compare_hkl$(EXEEXT): $(src_compare_hkl_OBJECTS) $(src_compare_hkl_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/compare_hkl$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_compare_hkl_OBJECTS) $(src_compare_hkl_LDADD) $(LIBS)
+src/cubeit.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/render.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/stream.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/cubeit$(EXEEXT): $(src_cubeit_OBJECTS) $(src_cubeit_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/cubeit$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_cubeit_OBJECTS) $(src_cubeit_LDADD) $(LIBS)
+src/estimate_background.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/estimate_background$(EXEEXT): $(src_estimate_background_OBJECTS) $(src_estimate_background_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/estimate_background$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_estimate_background_OBJECTS) $(src_estimate_background_LDADD) $(LIBS)
+src/facetron.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/geometry.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/beam-parameters.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/post-refinement.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/hrs-scaling.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/facetron$(EXEEXT): $(src_facetron_OBJECTS) $(src_facetron_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/facetron$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_facetron_OBJECTS) $(src_facetron_LDADD) $(LIBS)
+src/get_hkl.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/get_hkl$(EXEEXT): $(src_get_hkl_OBJECTS) $(src_get_hkl_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/get_hkl$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_get_hkl_OBJECTS) $(src_get_hkl_LDADD) $(LIBS)
+src/hdfsee.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/displaywindow.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/hdfsee$(EXEEXT): $(src_hdfsee_OBJECTS) $(src_hdfsee_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/hdfsee$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_hdfsee_OBJECTS) $(src_hdfsee_LDADD) $(LIBS)
+src/indexamajig.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/index.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/diffraction.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/dirax.$(OBJEXT): src/$(am__dirstamp) src/$(DEPDIR)/$(am__dirstamp)
+src/mosflm.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/templates.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/diffraction-gpu.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/cl-utils.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/indexamajig$(EXEEXT): $(src_indexamajig_OBJECTS) $(src_indexamajig_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/indexamajig$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_indexamajig_OBJECTS) $(src_indexamajig_LDADD) $(LIBS)
+src/pattern_sim.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/pattern_sim$(EXEEXT): $(src_pattern_sim_OBJECTS) $(src_pattern_sim_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/pattern_sim$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_pattern_sim_OBJECTS) $(src_pattern_sim_LDADD) $(LIBS)
+src/powder_plot.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/powder_plot$(EXEEXT): $(src_powder_plot_OBJECTS) $(src_powder_plot_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/powder_plot$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_powder_plot_OBJECTS) $(src_powder_plot_LDADD) $(LIBS)
+src/process_hkl.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/process_hkl$(EXEEXT): $(src_process_hkl_OBJECTS) $(src_process_hkl_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/process_hkl$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_process_hkl_OBJECTS) $(src_process_hkl_LDADD) $(LIBS)
+src/reintegrate.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/reintegrate$(EXEEXT): $(src_reintegrate_OBJECTS) $(src_reintegrate_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/reintegrate$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_reintegrate_OBJECTS) $(src_reintegrate_LDADD) $(LIBS)
+src/render_hkl.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/povray.$(OBJEXT): src/$(am__dirstamp) \
+	src/$(DEPDIR)/$(am__dirstamp)
+src/render_hkl$(EXEEXT): $(src_render_hkl_OBJECTS) $(src_render_hkl_DEPENDENCIES) src/$(am__dirstamp)
+	@rm -f src/render_hkl$(EXEEXT)
+	$(AM_V_CCLD)$(LINK) $(src_render_hkl_OBJECTS) $(src_render_hkl_LDADD) $(LIBS)
+
+mostlyclean-compile:
+	-rm -f *.$(OBJEXT)
+	-rm -f src/beam-parameters.$(OBJEXT)
+	-rm -f src/calibrate_detector.$(OBJEXT)
+	-rm -f src/cell.$(OBJEXT)
+	-rm -f src/check_hkl.$(OBJEXT)
+	-rm -f src/cl-utils.$(OBJEXT)
+	-rm -f src/compare_hkl.$(OBJEXT)
+	-rm -f src/cubeit.$(OBJEXT)
+	-rm -f src/detector.$(OBJEXT)
+	-rm -f src/diffraction-gpu.$(OBJEXT)
+	-rm -f src/diffraction.$(OBJEXT)
+	-rm -f src/dirax.$(OBJEXT)
+	-rm -f src/displaywindow.$(OBJEXT)
+	-rm -f src/estimate_background.$(OBJEXT)
+	-rm -f src/facetron.$(OBJEXT)
+	-rm -f src/filters.$(OBJEXT)
+	-rm -f src/geometry.$(OBJEXT)
+	-rm -f src/get_hkl.$(OBJEXT)
+	-rm -f src/hdf5-file.$(OBJEXT)
+	-rm -f src/hdfsee.$(OBJEXT)
+	-rm -f src/hrs-scaling.$(OBJEXT)
+	-rm -f src/image.$(OBJEXT)
+	-rm -f src/index.$(OBJEXT)
+	-rm -f src/indexamajig.$(OBJEXT)
+	-rm -f src/mosflm.$(OBJEXT)
+	-rm -f src/pattern_sim.$(OBJEXT)
+	-rm -f src/peaks.$(OBJEXT)
+	-rm -f src/post-refinement.$(OBJEXT)
+	-rm -f src/povray.$(OBJEXT)
+	-rm -f src/powder_plot.$(OBJEXT)
+	-rm -f src/process_hkl.$(OBJEXT)
+	-rm -f src/reflections.$(OBJEXT)
+	-rm -f src/reintegrate.$(OBJEXT)
+	-rm -f src/render.$(OBJEXT)
+	-rm -f src/render_hkl.$(OBJEXT)
+	-rm -f src/sfac.$(OBJEXT)
+	-rm -f src/statistics.$(OBJEXT)
+	-rm -f src/stream.$(OBJEXT)
+	-rm -f src/symmetry.$(OBJEXT)
+	-rm -f src/templates.$(OBJEXT)
+	-rm -f src/thread-pool.$(OBJEXT)
+	-rm -f src/utils.$(OBJEXT)
+
+distclean-compile:
+	-rm -f *.tab.c
+
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/beam-parameters.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/calibrate_detector.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/cell.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/check_hkl.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/cl-utils.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/compare_hkl.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/cubeit.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/detector.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/diffraction-gpu.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/diffraction.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/dirax.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/displaywindow.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/estimate_background.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/facetron.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/filters.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/geometry.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/get_hkl.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/hdf5-file.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/hdfsee.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/hrs-scaling.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/image.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/index.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/indexamajig.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/mosflm.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/pattern_sim.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/peaks.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/post-refinement.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/povray.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/powder_plot.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/process_hkl.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/reflections.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/reintegrate.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/render.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/render_hkl.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/sfac.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/statistics.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/stream.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/symmetry.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/templates.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/thread-pool.Po@am__quote@
+@AMDEP_TRUE@@am__include@ @am__quote@src/$(DEPDIR)/utils.Po@am__quote@
+
+.c.o:
+@am__fastdepCC_TRUE@	$(AM_V_CC)depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.o$$||'`;\
+@am__fastdepCC_TRUE@	$(COMPILE) -MT $@ -MD -MP -MF $$depbase.Tpo -c -o $@ $< &&\
+@am__fastdepCC_TRUE@	$(am__mv) $$depbase.Tpo $$depbase.Po
+@am__fastdepCC_FALSE@	$(AM_V_CC) @AM_BACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c -o $@ $<
+
+.c.obj:
+@am__fastdepCC_TRUE@	$(AM_V_CC)depbase=`echo $@ | sed 's|[^/]*$$|$(DEPDIR)/&|;s|\.obj$$||'`;\
+@am__fastdepCC_TRUE@	$(COMPILE) -MT $@ -MD -MP -MF $$depbase.Tpo -c -o $@ `$(CYGPATH_W) '$<'` &&\
+@am__fastdepCC_TRUE@	$(am__mv) $$depbase.Tpo $$depbase.Po
+@am__fastdepCC_FALSE@	$(AM_V_CC) @AM_BACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@	DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
+@am__fastdepCC_FALSE@	$(COMPILE) -c -o $@ `$(CYGPATH_W) '$<'`
+install-crystfelDATA: $(crystfel_DATA)
+	@$(NORMAL_INSTALL)
+	test -z "$(crystfeldir)" || $(MKDIR_P) "$(DESTDIR)$(crystfeldir)"
+	@list='$(crystfel_DATA)'; test -n "$(crystfeldir)" || list=; \
+	for p in $$list; do \
+	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+	  echo "$$d$$p"; \
+	done | $(am__base_list) | \
+	while read files; do \
+	  echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(crystfeldir)'"; \
+	  $(INSTALL_DATA) $$files "$(DESTDIR)$(crystfeldir)" || exit $$?; \
+	done
+
+uninstall-crystfelDATA:
+	@$(NORMAL_UNINSTALL)
+	@list='$(crystfel_DATA)'; test -n "$(crystfeldir)" || list=; \
+	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
+	test -n "$$files" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(crystfeldir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(crystfeldir)" && rm -f $$files
+install-crystfeldocDATA: $(crystfeldoc_DATA)
+	@$(NORMAL_INSTALL)
+	test -z "$(crystfeldocdir)" || $(MKDIR_P) "$(DESTDIR)$(crystfeldocdir)"
+	@list='$(crystfeldoc_DATA)'; test -n "$(crystfeldocdir)" || list=; \
+	for p in $$list; do \
+	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+	  echo "$$d$$p"; \
+	done | $(am__base_list) | \
+	while read files; do \
+	  echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(crystfeldocdir)'"; \
+	  $(INSTALL_DATA) $$files "$(DESTDIR)$(crystfeldocdir)" || exit $$?; \
+	done
+
+uninstall-crystfeldocDATA:
+	@$(NORMAL_UNINSTALL)
+	@list='$(crystfeldoc_DATA)'; test -n "$(crystfeldocdir)" || list=; \
+	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
+	test -n "$$files" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(crystfeldocdir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(crystfeldocdir)" && rm -f $$files
+install-hdfseeDATA: $(hdfsee_DATA)
+	@$(NORMAL_INSTALL)
+	test -z "$(hdfseedir)" || $(MKDIR_P) "$(DESTDIR)$(hdfseedir)"
+	@list='$(hdfsee_DATA)'; test -n "$(hdfseedir)" || list=; \
+	for p in $$list; do \
+	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+	  echo "$$d$$p"; \
+	done | $(am__base_list) | \
+	while read files; do \
+	  echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(hdfseedir)'"; \
+	  $(INSTALL_DATA) $$files "$(DESTDIR)$(hdfseedir)" || exit $$?; \
+	done
+
+uninstall-hdfseeDATA:
+	@$(NORMAL_UNINSTALL)
+	@list='$(hdfsee_DATA)'; test -n "$(hdfseedir)" || list=; \
+	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
+	test -n "$$files" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(hdfseedir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(hdfseedir)" && rm -f $$files
+install-scriptDATA: $(script_DATA)
+	@$(NORMAL_INSTALL)
+	test -z "$(scriptdir)" || $(MKDIR_P) "$(DESTDIR)$(scriptdir)"
+	@list='$(script_DATA)'; test -n "$(scriptdir)" || list=; \
+	for p in $$list; do \
+	  if test -f "$$p"; then d=; else d="$(srcdir)/"; fi; \
+	  echo "$$d$$p"; \
+	done | $(am__base_list) | \
+	while read files; do \
+	  echo " $(INSTALL_DATA) $$files '$(DESTDIR)$(scriptdir)'"; \
+	  $(INSTALL_DATA) $$files "$(DESTDIR)$(scriptdir)" || exit $$?; \
+	done
+
+uninstall-scriptDATA:
+	@$(NORMAL_UNINSTALL)
+	@list='$(script_DATA)'; test -n "$(scriptdir)" || list=; \
+	files=`for p in $$list; do echo $$p; done | sed -e 's|^.*/||'`; \
+	test -n "$$files" || exit 0; \
+	echo " ( cd '$(DESTDIR)$(scriptdir)' && rm -f" $$files ")"; \
+	cd "$(DESTDIR)$(scriptdir)" && rm -f $$files
 
 # This directory's subdirectories are mostly independent; you can cd
 # into them and run `make' without going through this Makefile.
@@ -679,9 +1351,12 @@ distcleancheck: distclean
 	       exit 1; } >&2
 check-am: all-am
 check: check-recursive
-all-am: Makefile config.h
+all-am: Makefile $(PROGRAMS) $(DATA) config.h
 installdirs: installdirs-recursive
 installdirs-am:
+	for dir in "$(DESTDIR)$(bindir)" "$(DESTDIR)$(crystfeldir)" "$(DESTDIR)$(crystfeldocdir)" "$(DESTDIR)$(hdfseedir)" "$(DESTDIR)$(scriptdir)"; do \
+	  test -z "$$dir" || $(MKDIR_P) "$$dir"; \
+	done
 install: install-recursive
 install-exec: install-exec-recursive
 install-data: install-data-recursive
@@ -703,18 +1378,22 @@ clean-generic:
 distclean-generic:
 	-test -z "$(CONFIG_CLEAN_FILES)" || rm -f $(CONFIG_CLEAN_FILES)
 	-test . = "$(srcdir)" || test -z "$(CONFIG_CLEAN_VPATH_FILES)" || rm -f $(CONFIG_CLEAN_VPATH_FILES)
+	-rm -f src/$(DEPDIR)/$(am__dirstamp)
+	-rm -f src/$(am__dirstamp)
 
 maintainer-clean-generic:
 	@echo "This command is intended for maintainers to use"
 	@echo "it deletes files that may require special tools to rebuild."
 clean: clean-recursive
 
-clean-am: clean-generic mostlyclean-am
+clean-am: clean-binPROGRAMS clean-generic mostlyclean-am
 
 distclean: distclean-recursive
 	-rm -f $(am__CONFIG_DISTCLEAN_FILES)
+	-rm -rf src/$(DEPDIR)
 	-rm -f Makefile
-distclean-am: clean-am distclean-generic distclean-hdr distclean-tags
+distclean-am: clean-am distclean-compile distclean-generic \
+	distclean-hdr distclean-tags
 
 dvi: dvi-recursive
 
@@ -728,13 +1407,14 @@ info: info-recursive
 
 info-am:
 
-install-data-am:
+install-data-am: install-crystfelDATA install-crystfeldocDATA \
+	install-hdfseeDATA install-scriptDATA
 
 install-dvi: install-dvi-recursive
 
 install-dvi-am:
 
-install-exec-am:
+install-exec-am: install-binPROGRAMS
 
 install-html: install-html-recursive
 
@@ -759,12 +1439,13 @@ installcheck-am:
 maintainer-clean: maintainer-clean-recursive
 	-rm -f $(am__CONFIG_DISTCLEAN_FILES)
 	-rm -rf $(top_srcdir)/autom4te.cache
+	-rm -rf src/$(DEPDIR)
 	-rm -f Makefile
 maintainer-clean-am: distclean-am maintainer-clean-generic
 
 mostlyclean: mostlyclean-recursive
 
-mostlyclean-am: mostlyclean-generic
+mostlyclean-am: mostlyclean-compile mostlyclean-generic
 
 pdf: pdf-recursive
 
@@ -774,25 +1455,33 @@ ps: ps-recursive
 
 ps-am:
 
-uninstall-am:
+uninstall-am: uninstall-binPROGRAMS uninstall-crystfelDATA \
+	uninstall-crystfeldocDATA uninstall-hdfseeDATA \
+	uninstall-scriptDATA
 
 .MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) all \
 	ctags-recursive install-am install-strip tags-recursive
 
 .PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
-	all all-am am--refresh check check-am clean clean-generic \
-	ctags ctags-recursive dist dist-all dist-bzip2 dist-gzip \
-	dist-lzma dist-shar dist-tarZ dist-xz dist-zip distcheck \
-	distclean distclean-generic distclean-hdr distclean-tags \
-	distcleancheck distdir distuninstallcheck dvi dvi-am html \
-	html-am info info-am install install-am install-data \
-	install-data-am install-dvi install-dvi-am install-exec \
-	install-exec-am install-html install-html-am install-info \
+	all all-am am--refresh check check-am clean clean-binPROGRAMS \
+	clean-generic ctags ctags-recursive dist dist-all dist-bzip2 \
+	dist-gzip dist-lzma dist-shar dist-tarZ dist-xz dist-zip \
+	distcheck distclean distclean-compile distclean-generic \
+	distclean-hdr distclean-tags distcleancheck distdir \
+	distuninstallcheck dvi dvi-am html html-am info info-am \
+	install install-am install-binPROGRAMS install-crystfelDATA \
+	install-crystfeldocDATA install-data install-data-am \
+	install-dvi install-dvi-am install-exec install-exec-am \
+	install-hdfseeDATA install-html install-html-am install-info \
 	install-info-am install-man install-pdf install-pdf-am \
-	install-ps install-ps-am install-strip installcheck \
-	installcheck-am installdirs installdirs-am maintainer-clean \
-	maintainer-clean-generic mostlyclean mostlyclean-generic pdf \
-	pdf-am ps ps-am tags tags-recursive uninstall uninstall-am
+	install-ps install-ps-am install-scriptDATA install-strip \
+	installcheck installcheck-am installdirs installdirs-am \
+	maintainer-clean maintainer-clean-generic mostlyclean \
+	mostlyclean-compile mostlyclean-generic pdf pdf-am ps ps-am \
+	tags tags-recursive uninstall uninstall-am \
+	uninstall-binPROGRAMS uninstall-crystfelDATA \
+	uninstall-crystfeldocDATA uninstall-hdfseeDATA \
+	uninstall-scriptDATA
 
 
 # Tell versions [3.59,3.63) of GNU make to not export all variables.