diff options
author | Thomas White <taw@bitwiz.org.uk> | 2011-03-26 20:26:06 +0100 |
---|---|---|
committer | Thomas White <taw@physics.org> | 2012-02-22 15:27:21 +0100 |
commit | cf481c5e99e6923358687d66fd6afecc95625a57 (patch) | |
tree | ad847b8243eda52ffc8081880dd402dc39e5fbed /doc/reference | |
parent | 03acd73808f6f21bbfc38300796b24ecf823a697 (diff) |
Add documentation via gtk-doc
Diffstat (limited to 'doc/reference')
-rw-r--r-- | doc/reference/CrystFEL-docs.sgml | 39 | ||||
-rw-r--r-- | doc/reference/CrystFEL-sections.txt | 41 | ||||
-rw-r--r-- | doc/reference/Makefile.am | 102 | ||||
-rw-r--r-- | doc/reference/Makefile.in | 838 |
4 files changed, 1020 insertions, 0 deletions
diff --git a/doc/reference/CrystFEL-docs.sgml b/doc/reference/CrystFEL-docs.sgml new file mode 100644 index 00000000..08f97f3d --- /dev/null +++ b/doc/reference/CrystFEL-docs.sgml @@ -0,0 +1,39 @@ +<?xml version="1.0"?> +<!DOCTYPE book PUBLIC "-//OASIS//DTD DocBook XML V4.3//EN" + "http://www.oasis-open.org/docbook/xml/4.3/docbookx.dtd" +[ + <!ENTITY % local.common.attrib "xmlns:xi CDATA #FIXED 'http://www.w3.org/2003/XInclude'"> +]> +<book id="index"> + <bookinfo> + <title>CrystFEL Reference Manual</title> + <releaseinfo> + For CrystFEL 0.2.0. + </releaseinfo> + This is the internal documentation for CrystFEL. Unless you are looking at + the code, writing new programs or fixing bugs, you should not need to read + this. + </bookinfo> + + <chapter> + <title>Images</title> + <xi:include href="xml/image.xml"/> + </chapter> + + <chapter> + <title>Handling reflection data</title> + <xi:include href="xml/reflist.xml"/> + <xi:include href="xml/reflitemlist.xml"/> + </chapter> + + <chapter> + <title>Miscellaneous</title> + <xi:include href="xml/quaternion.xml"/> + <xi:include href="xml/utils.xml"/> + </chapter> + + <index id="api-index-full"> + <title>API Index</title> + <xi:include href="xml/api-index-full.xml"><xi:fallback /></xi:include> + </index> +</book> diff --git a/doc/reference/CrystFEL-sections.txt b/doc/reference/CrystFEL-sections.txt new file mode 100644 index 00000000..1adda7b5 --- /dev/null +++ b/doc/reference/CrystFEL-sections.txt @@ -0,0 +1,41 @@ +<SECTION> +<FILE>reflist</FILE> +RefList +Reflection +<SUBSECTION> +reflist_new +reflist_free +<SUBSECTION> +find_refl +next_found_refl +optimise_reflist +<SUBSECTION> +get_excitation_error +get_detector_pos +get_indices +get_partiality +get_intensity +get_partial +</SECTION> + +<SECTION> +<FILE>reflitemlist</FILE> +ReflItemList +<SUBSECTION> +new_items +</SECTION> + +<SECTION> +<FILE>utils</FILE> +show_matrix_eqn +</SECTION> + +<SECTION> +<FILE>quaternion</FILE> +quaternion +</SECTION> + +<SECTION> +<FILE>image</FILE> +image +</SECTION> diff --git a/doc/reference/Makefile.am b/doc/reference/Makefile.am new file mode 100644 index 00000000..fcc9f152 --- /dev/null +++ b/doc/reference/Makefile.am @@ -0,0 +1,102 @@ +## Process this file with automake to produce Makefile.in + +# We require automake 1.6 at least. +AUTOMAKE_OPTIONS = 1.6 + +# This is a blank Makefile.am for using gtk-doc. +# Copy this to your project's API docs directory and modify the variables to +# suit your project. See the GTK+ Makefiles in gtk+/docs/reference for examples +# of using the various options. + +# The name of the module, e.g. 'glib'. +DOC_MODULE=CrystFEL + +# Uncomment for versioned docs and specify the version of the module, e.g. '2'. +#DOC_MODULE_VERSION=2 + + +# The top-level SGML file. You can change this if you want to. +DOC_MAIN_SGML_FILE=$(DOC_MODULE)-docs.sgml + +# Directories containing the source code, relative to $(srcdir). +# gtk-doc will search all .c and .h files beneath these paths +# for inline comments documenting functions and macros. +# e.g. DOC_SOURCE_DIR=../../../gtk ../../../gdk +DOC_SOURCE_DIR=../../src + +# Extra options to pass to gtkdoc-scangobj. Not normally needed. +SCANGOBJ_OPTIONS= + +# Extra options to supply to gtkdoc-scan. +# e.g. SCAN_OPTIONS=--deprecated-guards="GTK_DISABLE_DEPRECATED" +SCAN_OPTIONS= + +# Extra options to supply to gtkdoc-mkdb. +# e.g. MKDB_OPTIONS=--sgml-mode --output-format=xml +MKDB_OPTIONS=--sgml-mode --output-format=xml + +# Extra options to supply to gtkdoc-mktmpl +# e.g. MKTMPL_OPTIONS=--only-section-tmpl +MKTMPL_OPTIONS= + +# Extra options to supply to gtkdoc-mkhtml +MKHTML_OPTIONS= + +# Extra options to supply to gtkdoc-fixref. Not normally needed. +# e.g. FIXXREF_OPTIONS=--extra-dir=../gdk-pixbuf/html --extra-dir=../gdk/html +FIXXREF_OPTIONS= + +# Used for dependencies. The docs will be rebuilt if any of these change. +# e.g. HFILE_GLOB=$(top_srcdir)/gtk/*.h +# e.g. CFILE_GLOB=$(top_srcdir)/gtk/*.c +HFILE_GLOB=$(top_srcdir)/src/*.h +CFILE_GLOB=$(top_srcdir)/src/*.c + +# Extra header to include when scanning, which are not under DOC_SOURCE_DIR +# e.g. EXTRA_HFILES=$(top_srcdir}/contrib/extra.h +EXTRA_HFILES= + +# Header files to ignore when scanning. Use base file name, no paths +# e.g. IGNORE_HFILES=gtkdebug.h gtkintl.h +IGNORE_HFILES= + +# Images to copy into HTML directory. +# e.g. HTML_IMAGES=$(top_srcdir)/gtk/stock-icons/stock_about_24.png +HTML_IMAGES= + +# Extra SGML files that are included by $(DOC_MAIN_SGML_FILE). +# e.g. content_files=running.sgml building.sgml changes-2.0.sgml +content_files= + +# SGML files where gtk-doc abbrevations (#GtkWidget) are expanded +# These files must be listed here *and* in content_files +# e.g. expand_content_files=running.sgml +expand_content_files= + +# CFLAGS and LDFLAGS for compiling gtkdoc-scangobj with your library. +# Only needed if you are using gtkdoc-scangobj to dynamically query widget +# signals and properties. +# e.g. GTKDOC_CFLAGS=-I$(top_srcdir) -I$(top_builddir) $(GTK_DEBUG_FLAGS) +# e.g. GTKDOC_LIBS=$(top_builddir)/gtk/$(gtktargetlib) +GTKDOC_CFLAGS= +GTKDOC_LIBS= + +# This includes the standard gtk-doc make rules, copied by gtkdocize. +include $(top_srcdir)/gtk-doc.make + +# Other files to distribute +# e.g. EXTRA_DIST += version.xml.in +EXTRA_DIST += + +# Files not to distribute +# for --rebuild-types in $(SCAN_OPTIONS), e.g. $(DOC_MODULE).types +# for --rebuild-sections in $(SCAN_OPTIONS) e.g. $(DOC_MODULE)-sections.txt +#DISTCLEANFILES += + +# Comment this out if you want your docs-status tested during 'make check' +if ENABLE_GTK_DOC +TESTS_ENVIRONMENT = cd $(srcsrc) && +TESTS = $(GTKDOC_CHECK) +endif + +-include $(top_srcdir)/git.mk diff --git a/doc/reference/Makefile.in b/doc/reference/Makefile.in new file mode 100644 index 00000000..754d952f --- /dev/null +++ b/doc/reference/Makefile.in @@ -0,0 +1,838 @@ +# Makefile.in generated by automake 1.11.1 from Makefile.am. +# @configure_input@ + +# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, +# 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation, +# Inc. +# This Makefile.in is free software; the Free Software Foundation +# gives unlimited permission to copy and/or distribute it, +# with or without modifications, as long as this notice is preserved. + +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY, to the extent permitted by law; without +# even the implied warranty of MERCHANTABILITY or FITNESS FOR A +# PARTICULAR PURPOSE. + +@SET_MAKE@ + +# -*- mode: makefile -*- + +#################################### +# Everything below here is generic # +#################################### +VPATH = @srcdir@ +pkgdatadir = $(datadir)/@PACKAGE@ +pkgincludedir = $(includedir)/@PACKAGE@ +pkglibdir = $(libdir)/@PACKAGE@ +pkglibexecdir = $(libexecdir)/@PACKAGE@ +am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd +install_sh_DATA = $(install_sh) -c -m 644 +install_sh_PROGRAM = $(install_sh) -c +install_sh_SCRIPT = $(install_sh) -c +INSTALL_HEADER = $(INSTALL_DATA) +transform = $(program_transform_name) +NORMAL_INSTALL = : +PRE_INSTALL = : +POST_INSTALL = : +NORMAL_UNINSTALL = : +PRE_UNINSTALL = : 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See the GTK+ Makefiles in gtk+/docs/reference for examples +# of using the various options. + +# The name of the module, e.g. 'glib'. +DOC_MODULE = CrystFEL + +# Uncomment for versioned docs and specify the version of the module, e.g. '2'. +#DOC_MODULE_VERSION=2 + +# The top-level SGML file. You can change this if you want to. +DOC_MAIN_SGML_FILE = $(DOC_MODULE)-docs.sgml + +# Directories containing the source code, relative to $(srcdir). +# gtk-doc will search all .c and .h files beneath these paths +# for inline comments documenting functions and macros. +# e.g. DOC_SOURCE_DIR=../../../gtk ../../../gdk +DOC_SOURCE_DIR = ../../src + +# Extra options to pass to gtkdoc-scangobj. 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The docs will be rebuilt if any of these change. +# e.g. HFILE_GLOB=$(top_srcdir)/gtk/*.h +# e.g. CFILE_GLOB=$(top_srcdir)/gtk/*.c +HFILE_GLOB = $(top_srcdir)/src/*.h +CFILE_GLOB = $(top_srcdir)/src/*.c + +# Extra header to include when scanning, which are not under DOC_SOURCE_DIR +# e.g. EXTRA_HFILES=$(top_srcdir}/contrib/extra.h +EXTRA_HFILES = + +# Header files to ignore when scanning. 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for i in $(DOC_SOURCE_DIR) ; do \ + _source_dir="$${_source_dir} --source-dir=$$i" ; \ + done ; \ + cd $(srcdir) && \ + gtkdoc-scan --module=$(DOC_MODULE) --ignore-headers="$(IGNORE_HFILES)" $${_source_dir} $(SCAN_OPTIONS) $(EXTRA_HFILES) + @if grep -l '^..*$$' $(srcdir)/$(DOC_MODULE).types > /dev/null 2>&1 ; then \ + CC="$(GTKDOC_CC)" LD="$(GTKDOC_LD)" RUN="$(GTKDOC_RUN)" CFLAGS="$(GTKDOC_CFLAGS) $(CFLAGS)" LDFLAGS="$(GTKDOC_LIBS) $(LDFLAGS)" gtkdoc-scangobj $(SCANGOBJ_OPTIONS) --module=$(DOC_MODULE) --output-dir=$(srcdir) ; \ + else \ + cd $(srcdir) ; \ + for i in $(SCANOBJ_FILES) ; do \ + test -f $$i || touch $$i ; \ + done \ + fi + @touch scan-build.stamp + +$(DOC_MODULE)-decl.txt $(SCANOBJ_FILES) $(DOC_MODULE)-sections.txt $(DOC_MODULE)-overrides.txt: scan-build.stamp + @true + +#### xml #### + +sgml-build.stamp: $(DOC_MODULE)-decl.txt $(SCANOBJ_FILES) $(DOC_MODULE)-sections.txt $(DOC_MODULE)-overrides.txt $(expand_content_files) + @echo 'gtk-doc: Building XML' + @-chmod -R u+w $(srcdir) + @_source_dir='' ; 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