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authorThomas White <taw@physics.org>2016-02-05 15:33:18 +0100
committerThomas White <taw@physics.org>2016-02-05 15:33:18 +0100
commit775afe633f3cc104b916bbf5f0b43c2225999d53 (patch)
treeb98c2fedf1e80b95a35f7695ec7b40ef96a046f1 /doc
parent0872486795f6235180a133a5ce89e7c98aa02107 (diff)
Update docs
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-rw-r--r--doc/man/partialator.17
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diff --git a/doc/man/partialator.1 b/doc/man/partialator.1
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--- a/doc/man/partialator.1
+++ b/doc/man/partialator.1
@@ -1,7 +1,7 @@
.\"
.\" partialator man page
.\"
-.\" Copyright © 2012-2015 Deutsches Elektronen-Synchrotron DESY,
+.\" Copyright © 2012-2016 Deutsches Elektronen-Synchrotron DESY,
.\" a research centre of the Helmholtz Association.
.\"
.\" Part of CrystFEL - crystallography with a FEL
@@ -127,6 +127,11 @@ Read a list of filenames, event IDs and dataset IDs from \fIfilename\fR. See th
.PD
Reject crystals if the absolute values of their relative Debye-Waller ("B") factors are more than \fIn\fR square Angstroms. The default is \fB--max-rel-B=100\fR.
+.PD 0
+.IP \fB--output-every-cycle\fR
+.PD
+Write out the per-crystal parameters and reflection lists after every cycle of refinement, instead of only at the end. The intermediate reflection lists and parameter filenames will be prefixed with \fBiter\fIN\fB_\fR (note the trailing underscore), where \fIN\fR is the iteration number. If you use \fB--custom-split\fR, intermediate results will also be output for each custom dataset.
+
.SH PARTIALITY MODELS
The available partiality models are: