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authorThomas White <taw@physics.org>2019-03-22 13:56:49 +0100
committerThomas White <taw@physics.org>2019-04-15 10:36:29 +0200
commit1f3acd25cad8aae5033ab7a1ed86cf0691a96809 (patch)
tree2c4fbaa6c80aa226eeccca4bbb3f70405c415494 /libcrystfel
parent8da7228fdf9348343ac6082f9efe74314c7cef6c (diff)
Strip ouf CBFlib references
Diffstat (limited to 'libcrystfel')
-rw-r--r--libcrystfel/CMakeLists.txt7
-rw-r--r--libcrystfel/src/image.c159
2 files changed, 0 insertions, 166 deletions
diff --git a/libcrystfel/CMakeLists.txt b/libcrystfel/CMakeLists.txt
index 014d2a5a..d1d46b81 100644
--- a/libcrystfel/CMakeLists.txt
+++ b/libcrystfel/CMakeLists.txt
@@ -1,7 +1,6 @@
project(libcrystfel VERSION ${CRYSTFEL_SHORT_VERSION} LANGUAGES C)
find_package(Curses)
-find_package(CBF)
find_package(XGANDALF)
find_package(PINKINDEXER)
find_package(NBP)
@@ -15,7 +14,6 @@ set(HAVE_CURSES ${CURSES_FOUND})
set(HAVE_FFTW ${FFTW_FOUND})
set(HAVE_XGANDALF ${XGANDALF_FOUND})
set(HAVE_FDIP ${FDIP_FOUND})
-set(HAVE_CBFLIB ${CBF_FOUND})
# Find out where forkpty() is declared
set(CMAKE_REQUIRED_LIBRARIES "-lutil")
@@ -161,11 +159,6 @@ if (FFTW_FOUND)
target_link_libraries(${PROJECT_NAME} PRIVATE ${FFTW_LDFLAGS})
endif (FFTW_FOUND)
-if (CBF_FOUND)
- target_include_directories(${PROJECT_NAME} PRIVATE ${CBF_INCLUDES})
- target_link_libraries(${PROJECT_NAME} PRIVATE ${CBF_LIBRARIES})
-endif (CBF_FOUND)
-
if (CURSES_FOUND)
target_include_directories(${PROJECT_NAME} PRIVATE ${CURSES_INCLUDE_DIRS})
target_link_libraries(${PROJECT_NAME} PRIVATE ${CURSES_LIBRARIES})
diff --git a/libcrystfel/src/image.c b/libcrystfel/src/image.c
index 8c47d3cf..2306d6e7 100644
--- a/libcrystfel/src/image.c
+++ b/libcrystfel/src/image.c
@@ -36,15 +36,6 @@
#include <hdf5.h>
#include <zlib.h>
-#ifdef HAVE_CBFLIB
-#ifdef HAVE_CBFLIB_CBF_H
-#include <cbflib/cbf.h>
-#endif
-#ifdef HAVE_CBF_CBF_H
-#include <cbf/cbf.h>
-#endif
-#endif
-
#include "image.h"
#include "utils.h"
#include "events.h"
@@ -406,40 +397,6 @@ void add_imagefile_field(struct imagefile_field_list *copyme, const char *name)
/******************************* CBF files ************************************/
-#ifdef HAVE_CBFLIB
-
-static char *cbf_strerr(int e)
-{
- char *err;
-
- err = malloc(1024);
- if ( err == NULL ) return NULL;
-
- err[0] = '\0';
-
- /* NB Sum of lengths of all strings must be less than 1024 */
- if ( e & CBF_FORMAT ) strcat(err, "Invalid format");
- if ( e & CBF_ALLOC ) strcat(err, "Memory allocation failed");
- if ( e & CBF_ARGUMENT ) strcat(err, "Invalid argument");
- if ( e & CBF_ASCII ) strcat(err, "Value is ASCII");
- if ( e & CBF_BINARY ) strcat(err, "Value is binary");
- if ( e & CBF_BITCOUNT ) strcat(err, "Wrong number of bits");
- if ( e & CBF_ENDOFDATA ) strcat(err, "End of data");
- if ( e & CBF_FILECLOSE ) strcat(err, "File close error");
- if ( e & CBF_FILEOPEN ) strcat(err, "File open error");
- if ( e & CBF_FILEREAD ) strcat(err, "File read error");
- if ( e & CBF_FILETELL ) strcat(err, "File tell error");
- if ( e & CBF_FILEWRITE ) strcat(err, "File write error");
- if ( e & CBF_IDENTICAL ) strcat(err, "Name already exists");
- if ( e & CBF_NOTFOUND ) strcat(err, "Not found");
- if ( e & CBF_OVERFLOW ) strcat(err, "Overflow");
- if ( e & CBF_UNDEFINED ) strcat(err, "Number undefined");
- if ( e & CBF_NOTIMPLEMENTED ) strcat(err, "Not implemented");
-
- return err;
-}
-
-
static int unpack_panels(struct image *image, float *data, int data_width,
int data_height)
{
@@ -684,103 +641,6 @@ static float *read_cbf_data(struct imagefile *f, int *w, int *h, cbf_handle *pcb
return NULL;
}
- if ( cbf_make_handle(&cbfh) ) {
- ERROR("Failed to allocate CBF handle\n");
- return NULL;
- }
-
- /* CBFlib will call fclose(fh) when it's ready */
-
- if ( cbf_read_widefile(cbfh, fh, 0) ) {
- ERROR("Failed to read CBF file '%s'\n", f->filename);
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- /* Select row 0 in data column inside array_data */
- cbf_find_category(cbfh, "array_data");
- cbf_find_column(cbfh, "data");
- cbf_select_row(cbfh, 0);
-
- /* Get parameters for array read */
- r = cbf_get_integerarrayparameters_wdims(cbfh, &compression, &binary_id,
- &elsize, &elsigned, &elunsigned,
- &elements,
- &minelement, &maxelement,
- &byteorder,
- &dimfast, &dimmid, &dimslow,
- &padding);
- if ( r ) {
- char *err = cbf_strerr(r);
- ERROR("Failed to read CBF array parameters: %s\n", err);
- free(err);
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- if ( dimslow != 0 ) {
- ERROR("CBF data array is 3D - don't know what to do with it\n");
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- if ( dimfast*dimmid*elsize > 10e9 ) {
- ERROR("CBF data is far too big (%i x %i x %i bytes).\n",
- (int)dimfast, (int)dimmid, (int)elsize);
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- if ( (elsize != 4) && (elsize != 2) ) {
- STATUS("Don't know what to do with element size %i\n",
- (int)elsize);
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- if ( !elsigned ) {
- STATUS("Don't know what to do with unsigned data (yet)\n");
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- if ( strcmp(byteorder, "little_endian") != 0 ) {
- STATUS("Don't know what to do with non-little-endian datan\n");
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- data = malloc(elsize*dimfast*dimmid);
- if ( data == NULL ) {
- ERROR("Failed to allocate memory for CBF data\n");
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- r = cbf_get_integerarray(cbfh, &binary_id, data, elsize, 1,
- elsize*dimfast*dimmid, &elread);
- if ( r ) {
- char *err = cbf_strerr(r);
- ERROR("Failed to read CBF array: %s\n", err);
- free(err);
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- if ( elsize == 4 ) {
- dataf = convert_sint32_float(data, dimfast, dimmid);
- } else if ( elsize == 2 ) {
- dataf = convert_sint16_float(data, dimfast, dimmid);
- } else {
- ERROR("Don't know how to convert element size %i\n",
- (int)elsize);
- cbf_free_handle(cbfh);
- return NULL;
- }
-
- free(data);
-
- free(buf); /* Might be NULL */
*w = dimfast;
*h = dimmid;
@@ -857,25 +717,6 @@ static int read_cbf_simple(struct imagefile *f, struct image *image)
}
-#else /* HAVE_CBFLIB */
-
-static int read_cbf_simple(struct imagefile *f, struct image *image)
-{
- ERROR("This version of CrystFEL was compiled without CBF support.\n");
- return 1;
-}
-
-
-static int read_cbf(struct imagefile *f, struct image *image)
-{
- ERROR("This version of CrystFEL was compiled without CBF support.\n");
- return 1;
-}
-
-
-#endif /* HAVE_CBFLIB */
-
-
/****************************** Image files ***********************************/