diff options
| author | Thomas White <taw@physics.org> | 2020-07-06 11:28:19 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2020-07-29 18:53:45 +0200 |
| commit | 4e64ee724415f5e2e0acf2846c77bbf293368364 (patch) | |
| tree | 16466029675786e57317e91a5103598de5ca93a1 /src/gui_peaksearch.c | |
| parent | 8803685ce598651fbf3755fd0e36fd689637698c (diff) | |
Add peakfinder9 to GUI
Diffstat (limited to 'src/gui_peaksearch.c')
| -rw-r--r-- | src/gui_peaksearch.c | 37 |
1 files changed, 33 insertions, 4 deletions
diff --git a/src/gui_peaksearch.c b/src/gui_peaksearch.c index ada652a6..fc82ed80 100644 --- a/src/gui_peaksearch.c +++ b/src/gui_peaksearch.c @@ -82,6 +82,16 @@ void update_peaks(struct crystfelproject *proj) 1); break; + case PEAK_PEAKFINDER9: + search_peaks_peakfinder9(proj->cur_image, + proj->peak_search_params.min_snr_biggest_pix, + proj->peak_search_params.min_snr_peak_pix, + proj->peak_search_params.min_snr, + proj->peak_search_params.min_sig, + proj->peak_search_params.min_peak_over_neighbour, + proj->peak_search_params.local_bg_radius); + break; + case PEAK_HDF5: case PEAK_CXI: proj->cur_image->features = image_read_peaks(proj->dtempl, @@ -329,6 +339,23 @@ static void peaksearch_algo_changed(GtkWidget *combo, add_int_param(proj->peak_params, "Maximum resolution (pixels):", &proj->peak_search_params.max_res, proj); + } else if ( strcmp(algo_id, "peakfinder9") == 0 ) { + + proj->peak_search_params.method = PEAK_PEAKFINDER9; + + add_float_param(proj->peak_params, "Minimum SNR of brightest pixel in peak:", + &proj->peak_search_params.min_snr_biggest_pix, proj); + add_float_param(proj->peak_params, "Minimum SNR of peak pixel:", + &proj->peak_search_params.min_snr_peak_pix, proj); + add_float_param(proj->peak_params, "Minimum signal/noise ratio:", + &proj->peak_search_params.min_snr, proj); + add_float_param(proj->peak_params, "Minimum background standard deviation:", + &proj->peak_search_params.min_sig, proj); + add_float_param(proj->peak_params, "Brightest pixel cutoff (just for speed):", + &proj->peak_search_params.min_peak_over_neighbour, proj); + add_int_param(proj->peak_params, "Local background radius:", + &proj->peak_search_params.local_bg_radius, proj); + } else if ( strcmp(algo_id, "hdf5") == 0 ) { proj->peak_search_params.method = PEAK_HDF5; @@ -422,10 +449,12 @@ gint peaksearch_sig(GtkWidget *widget, struct crystfelproject *proj) "Use the peak lists in the data files (hdf5/cxi)"); gtk_combo_box_text_append(GTK_COMBO_BOX_TEXT(combo), "peakfinder8", "Radial background estimation (peakfinder8)"); - #ifdef HAVE_FDIP - gtk_combo_box_text_append(GTK_COMBO_BOX_TEXT(combo), "peakfinder9", - "Local background estimation (peakfinder9)"); - #endif + + if ( crystfel_has_peakfinder9() ) { + gtk_combo_box_text_append(GTK_COMBO_BOX_TEXT(combo), "peakfinder9", + "Local background estimation (peakfinder9)"); + } + g_signal_connect(G_OBJECT(combo), "changed", G_CALLBACK(peaksearch_algo_changed), proj); gtk_combo_box_set_active_id(GTK_COMBO_BOX(combo), |