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authorThomas White <taw@physics.org>2018-11-22 16:19:21 +0100
committerThomas White <taw@physics.org>2018-11-22 16:20:40 +0100
commita166b0ae68b99bea3f2e08cc508a863a0f36073b (patch)
treed05946d0dd112ea30116f631250519b6bcffd7af /src/partialator.c
parentf30cc81c78493b3e0299f15a2ebf38aad2ba8e28 (diff)
Count crystals with no reflections in various FoMs
This is the most common cause of NaN residuals, so it seems better to report that there weren't enough reflections than to report a NaN.
Diffstat (limited to 'src/partialator.c')
-rw-r--r--src/partialator.c55
1 files changed, 46 insertions, 9 deletions
diff --git a/src/partialator.c b/src/partialator.c
index 86431e4c..10befba8 100644
--- a/src/partialator.c
+++ b/src/partialator.c
@@ -716,6 +716,10 @@ static void all_residuals(Crystal **crystals, int n_crystals, RefList *full,
int n_nan_linear_free = 0;
int n_nan_log = 0;
int n_nan_log_free = 0;
+ int n_non_linear = 0;
+ int n_non_linear_free = 0;
+ int n_non_log = 0;
+ int n_non_log_free = 0;
*presidual = 0.0;
*pfree_residual = 0.0;
@@ -725,19 +729,35 @@ static void all_residuals(Crystal **crystals, int n_crystals, RefList *full,
for ( i=0; i<n_crystals; i++ ) {
double r, free_r, log_r, free_log_r;
+ int n;
if ( crystal_get_user_flag(crystals[i]) ) continue;
/* Scaling should have been done right before calling this */
- r = residual(crystals[i], full, 0, NULL, NULL);
- free_r = residual(crystals[i], full, 1, NULL, NULL);
- log_r = log_residual(crystals[i], full, 0, NULL, NULL);
- free_log_r = log_residual(crystals[i], full, 1, NULL, NULL);
-
- if ( isnan(r) ) n_nan_linear++;
- if ( isnan(free_r) ) n_nan_linear_free++;
- if ( isnan(log_r) ) n_nan_log++;
- if ( isnan(free_log_r) ) n_nan_log_free++;
+ r = residual(crystals[i], full, 0, &n, NULL);
+ if ( n == 0 ) {
+ n_non_linear++;
+ } else if ( isnan(r) ) {
+ n_nan_linear++;
+ }
+ free_r = residual(crystals[i], full, 1, &n, NULL);
+ if ( n == 0 ) {
+ n_non_linear_free++;
+ } else if ( isnan(free_r) ) {
+ n_nan_linear_free++;
+ }
+ log_r = log_residual(crystals[i], full, 0, &n, NULL);
+ if ( n == 0 ) {
+ n_non_log++;
+ } else if ( isnan(log_r) ) {
+ n_nan_log++;
+ }
+ free_log_r = log_residual(crystals[i], full, 1, &n, NULL);
+ if ( n == 0 ) {
+ n_non_log_free++;
+ } else if ( isnan(free_log_r) ) {
+ n_nan_log_free++;
+ }
if ( isnan(r) || isnan(free_r)
|| isnan(log_r) || isnan(free_log_r) ) continue;
@@ -750,6 +770,23 @@ static void all_residuals(Crystal **crystals, int n_crystals, RefList *full,
n_used++;
}
+ if ( n_non_linear ) {
+ ERROR("WARNING: %i crystals had no reflections in linear "
+ "residual calculation\n", n_non_linear);
+ }
+ if ( n_non_linear_free ) {
+ ERROR("WARNING: %i crystals had no reflections in linear free "
+ "residual calculation\n", n_non_linear_free);
+ }
+ if ( n_non_log ) {
+ ERROR("WARNING: %i crystals had no reflections in log "
+ "residual calculation\n", n_non_log);
+ }
+ if ( n_non_log_free ) {
+ ERROR("WARNING: %i crystals had no reflections in log free "
+ "residual calculation\n", n_non_log_free);
+ }
+
if ( n_nan_linear ) {
ERROR("WARNING: %i crystals had NaN linear residuals\n",
n_nan_linear);