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Diffstat (limited to 'scripts/Rsplit_surface.py')
-rw-r--r-- | scripts/Rsplit_surface.py | 105 |
1 files changed, 105 insertions, 0 deletions
diff --git a/scripts/Rsplit_surface.py b/scripts/Rsplit_surface.py new file mode 100644 index 00000000..ae4e01ac --- /dev/null +++ b/scripts/Rsplit_surface.py @@ -0,0 +1,105 @@ +#!/usr/bin/python +# coding=utf-8 + +from __future__ import division +from array import array +from numpy import * + +import matplotlib + +# Rsplit_surface.py +# +# Plot Rsplit as a contour map +# +# Copyright © 2013 Fedor Chervinskii +# +# Authors: +# 2013 Fedor Chervinskii <fedor.chervinskii@gmail.com> +# +# This file is part of CrystFEL. +# +# CrystFEL is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# CrystFEL is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with CrystFEL. If not, see <http://www.gnu.org/licenses/>. + + +"""there could be problems with dependencies, in this case, """ +#matplotlib.use('PS') + +import matplotlib.pyplot as plt +from matplotlib import cm +from matplotlib.mlab import griddata +from mpl_toolkits.axes_grid1 import host_subplot +import mpl_toolkits.axisartist as AA +import sys + +plt.rc('text', usetex=True) +plt.rc('font', family='serif') + +data_name = sys.argv[1] + +Nfile = open('N.dat', 'r') +line = array(Nfile.readlines())[0] +N0 = eval(line.split()[0]) +steps = arange(1, 10) + +verts = [] + +for i in steps : + + filename='rsplit'+str(i)+'.dat' + + file = open(filename, 'r') + + lines = array(file.readlines()) + N = lines.size + + for j in range(1, N) : + numbers = lines[j].split() + if 0 < eval(numbers[1]) <= 100 : verts.append((eval(numbers[0]),i,eval(numbers[1]))) + +x, y, z = zip(*verts) + +fig = plt.figure() + +ax = host_subplot(111, axes_class=AA.Axes) + +X = arange(1, 5, 0.05) +Y = arange(0, 10, 0.1) +X, Y = meshgrid(X, Y) +Z = griddata(x,y,z,X,Y) + +cm = ax.pcolormesh(X, Y, Z, cmap = plt.get_cmap('spectral'), vmin=0, vmax=100) + +plt.title(r"$R_{split}$ surface for %s data $N_0$ = %d" % (data_name, N0), fontsize=16) + +ax.set_xlabel(r"1/d", fontsize=16) +ax.set_ylabel(r"Number of patterns", fontsize=16) +ypoints = [50000,40000,30000,20000,10000,9000,8000,7000,6000,5000,4000,3000,2000,1000,900,800,700,600,500,400,300,200,100] +temp = [] +for ypoint in ypoints : temp.append(N0/ypoint) +ax.set_yticks(log2(temp)+1) +labels = [] +for ypoint in ypoints : + if ypoint in [50000,10000,5000,1000,500] : labels.append(str(ypoint)) + else : labels.append("") + +ax.set_yticklabels(labels) + +ax.set_ylim(log2(temp[0])+1,log2(temp[-1])+1) + +fig.colorbar(cm, shrink=0.5, aspect=10) + +plt.savefig(data_name[:-7] + '.png') +#plt.savefig(data_name[:-7] + '.ps') +plt.show() + |