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Diffstat (limited to 'src/geoptimiser.c')
-rw-r--r--src/geoptimiser.c19
1 files changed, 9 insertions, 10 deletions
diff --git a/src/geoptimiser.c b/src/geoptimiser.c
index eda4e615..26e083e6 100644
--- a/src/geoptimiser.c
+++ b/src/geoptimiser.c
@@ -72,9 +72,7 @@ static void show_help(const char *s)
" -q, --quadrants=<rg_coll> Rigid group collection for quadrants.\n"
" -c, --connected=<rg_coll> Rigid group collection for connected\n"
" ASICs.\n"
-" -e, --error-maps Save error maps to disk, before and\n"
-" after optimization.\n"
-" Default: error maps are not saved.\n"
+" --no-error-maps Do not generate error map PNGs.\n"
" -x, --min-num-peaks-per-pixel=<num> Minimum number of peaks per pixel.\n"
" Default: 3. \n"
" -p, --min-num-peaks-per-panel=<num> Minimum number of peaks per pixel.\n"
@@ -2612,6 +2610,10 @@ int optimize_geometry(char *infile, char *outfile, char *geometry_filename,
return 1;
}
STATUS("All done!\n");
+ if ( error_maps ) {
+ STATUS("Be sure to inspect error_map_before.png and "
+ "error_map_after.png !!\n");
+ }
free(conn_data);
free(displ_x);
@@ -2641,7 +2643,7 @@ int main(int argc, char *argv[])
int only_best_distance = 0;
int nostretch = 0;
int individual_coffset = 0;
- int error_maps = 0;
+ int error_maps = 1;
double max_peak_dist = 4.0;
struct detector *det = NULL;
@@ -2664,16 +2666,16 @@ int main(int argc, char *argv[])
{"most-few-clen", 0, NULL, 'l'},
{"max-peak-dist", 1, NULL, 'm'},
{"individual-dist-offset", 0, NULL, 's'},
- {"error-maps", 0, NULL, 'e'},
/* Long-only options with no arguments */
- {"no-stretch", 0, &nostretch, 1},
+ {"no-stretch", 0, &nostretch, 1},
+ {"no-error-maps", 0, &error_maps, 0},
{0, 0, NULL, 0}
};
/* Short options */
- while ((c = getopt_long(argc, argv, "ho:i:g:q:c:o:x:p:lsm:e",
+ while ((c = getopt_long(argc, argv, "ho:i:g:q:c:o:x:p:lsm",
longopts, NULL)) != -1) {
switch (c) {
@@ -2733,9 +2735,6 @@ int main(int argc, char *argv[])
individual_coffset = 1;
break;
- case 'e' :
- error_maps = 1;
- break;
}
}