diff options
Diffstat (limited to 'src/indexamajig.c')
| -rw-r--r-- | src/indexamajig.c | 7 |
1 files changed, 1 insertions, 6 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c index 27ec31fc..208c0ed0 100644 --- a/src/indexamajig.c +++ b/src/indexamajig.c @@ -104,9 +104,6 @@ static void show_help(const char *s) "For more control over the process, you might need:\n\n" " --tolerance=<tol> Set the tolerances for cell comparison.\n" " Default: 5,5,5,1.5.\n" -" --filter-cm Perform common-mode noise subtraction on images\n" -" before proceeding. Intensities will be extracted\n" -" from the image as it is after this processing.\n" " --filter-noise Apply an aggressive noise filter which sets all\n" " pixels in each 3x3 region to zero if any of them\n" " have negative values. Intensity measurement will\n" @@ -114,7 +111,7 @@ static void show_help(const char *s) " --median-filter=<n> Apply a median filter to the image data. Intensity\n" " measurement will be performed on the image as it\n" " was before this. The side length of the median\n" -" filter box will be <n>. Default: 0 (no filter).\n" +" filter box will be 2<n>+1. Default: 0 (no filter).\n" " --no-sat-corr Don't correct values of saturated peaks using a\n" " table included in the HDF5 file.\n" " --threshold=<n> Only accept peaks above <n> ADU. Default: 800.\n" @@ -185,7 +182,6 @@ int main(int argc, char *argv[]) /* Defaults */ iargs.cell = NULL; - iargs.cmfilter = 0; iargs.noisefilter = 0; iargs.median_filter = 0; iargs.satcorr = 1; @@ -239,7 +235,6 @@ int main(int argc, char *argv[]) {"image", 1, NULL, 'e'}, /* Long-only options with no arguments */ - {"filter-cm", 0, &iargs.cmfilter, 1}, {"filter-noise", 0, &iargs.noisefilter, 1}, {"no-sat-corr", 0, &iargs.satcorr, 0}, {"sat-corr", 0, &iargs.satcorr, 1}, |