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-rw-r--r--src/indexamajig.c8
1 files changed, 7 insertions, 1 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c
index bd3b53e2..0f7154e8 100644
--- a/src/indexamajig.c
+++ b/src/indexamajig.c
@@ -57,6 +57,7 @@ struct process_args
int config_gpu;
int config_simulate;
int config_nomatch;
+ int config_unpolar;
IndexingMethod indm;
const double *intensities;
const unsigned int *counts;
@@ -118,6 +119,7 @@ static void show_help(const char *s)
" --no-match Don't attempt to match the indexed cell to the\n"
" model, just proceed with the one generated by the\n"
" auto-indexing procedure.\n"
+" --unpolarized Don't correct for the polarisation of the X-rays.\n"
"\n\nOptions for greater performance or verbosity:\n\n"
" --verbose Be verbose about indexing.\n"
" --gpu Use the GPU to speed up the simulation.\n"
@@ -237,6 +239,7 @@ static void *process_image(void *pargsv)
int config_gpu = pargs->config_gpu;
int config_simulate = pargs->config_simulate;
int config_nomatch = pargs->config_nomatch;
+ int config_unpolar = pargs->config_unpolar;
IndexingMethod indm = pargs->indm;
const double *intensities = pargs->intensities;
const unsigned int *counts = pargs->counts;
@@ -321,7 +324,7 @@ static void *process_image(void *pargsv)
/* Use original data (temporarily) */
simage->data = data_for_measurement;
output_intensities(simage, image.indexed_cell,
- pargs->output_mutex);
+ pargs->output_mutex, config_unpolar);
simage->data = NULL;
}
@@ -382,6 +385,7 @@ int main(int argc, char *argv[])
int config_gpu = 0;
int config_verbose = 0;
int config_alternate = 0;
+ int config_unpolar = 0;
IndexingMethod indm;
char *indm_str = NULL;
UnitCell *cell;
@@ -417,6 +421,7 @@ int main(int argc, char *argv[])
{"intensities", 1, NULL, 'q'},
{"pdb", 1, NULL, 'p'},
{"prefix", 1, NULL, 'x'},
+ {"unpolarized", 0, &config_unpolar, 1},
{0, 0, NULL, 0}
};
@@ -570,6 +575,7 @@ int main(int argc, char *argv[])
pargs->config_gpu = config_gpu;
pargs->config_simulate = config_simulate;
pargs->config_nomatch = config_nomatch;
+ pargs->config_unpolar = config_unpolar;
pargs->cell = cell;
pargs->indm = indm;
pargs->intensities = intensities;