diff options
Diffstat (limited to 'src/indexamajig.c')
| -rw-r--r-- | src/indexamajig.c | 8 |
1 files changed, 3 insertions, 5 deletions
diff --git a/src/indexamajig.c b/src/indexamajig.c index 4f28aec5..627dfa67 100644 --- a/src/indexamajig.c +++ b/src/indexamajig.c @@ -97,11 +97,9 @@ static void show_help(const char *s) " zaef : Use Zaefferer (2000) gradient detection.\n" " This is the default method.\n" " hdf5 : Get from a table in HDF5 file.\n" +" cxi : Get from CXI format HDF5 file.\n" " --hdf5-peaks=<p> Find peaks table in HDF5 file here.\n" " Default: /processing/hitfinder/peakinfo\n" -" --cxi-hdf5-peaks Peaks in the HDF5 file are in CXI file format.\n" -" Only used in conjunction with the --hdf5-peaks,\n" -" ignored otherwise." " --integration=<meth> Perform final pattern integration using <meth>.\n" "\n\n" "For more control over the process, you might need:\n\n" @@ -219,7 +217,6 @@ int main(int argc, char *argv[]) iargs.peaks = PEAK_ZAEF; iargs.beam = &beam; iargs.hdf5_peak_path = strdup("/processing/hitfinder/peakinfo"); - iargs.cxi_hdf5_peaks = 0; iargs.copyme = NULL; iargs.pk_inn = -1.0; iargs.pk_mid = -1.0; @@ -271,7 +268,6 @@ int main(int argc, char *argv[]) {"no-use-saturated", 0, &iargs.use_saturated, 0}, {"no-revalidate", 0, &iargs.no_revalidate, 1}, {"check-hdf5-snr", 0, &iargs.check_hdf5_snr, 1}, - {"cxi-hdf5-peaks", 0, &iargs.cxi_hdf5_peaks, 1}, /* Long-only options which don't actually do anything */ {"no-sat-corr", 0, &iargs.satcorr, 0}, @@ -513,6 +509,8 @@ int main(int argc, char *argv[]) iargs.peaks = PEAK_ZAEF; } else if ( strcmp(speaks, "hdf5") == 0 ) { iargs.peaks = PEAK_HDF5; + } else if ( strcmp(speaks, "cxi") == 0 ) { + iargs.peaks = PEAK_CXI; } else { ERROR("Unrecognised peak detection method '%s'\n", speaks); return 1; |