CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2012-12-14	Beam and detector geometry don't need to be copied	Thomas White
	The did when this was all done with threads, but with separate processes each worker has its own copy of the structure already. It can be updated after every image and freed at the end.
2012-12-14	Whitespace	Thomas White

2012-12-13	more user options for beam photon energy	Chun Hong Yoon

2012-12-05	Whitespace	Thomas White

2012-12-05	process_hkl: Add --min-measurements	Thomas White

2012-12-05	Add a FIXME	Thomas White

2012-12-05	Fix a typo in process_hkl(1)	Thomas White

2012-12-04	scripts/gen-sfs-ano: Check exit status of get_hkl	Thomas White

2012-12-04	get_hkl: Fix a segfault	Thomas White

2012-12-03	Remove data dir from INCLUDES	Thomas White
	This was needed before, but not any more.
2012-12-03	Add crystfel.pc file for pkg-config	Thomas White

2012-12-03	Treat SNR=nan (=0/0) as below any SNR threshold	Thomas White

2012-12-03	Fussiness	Thomas White

2012-12-03	Use a less scary message for EINTR	Thomas White
	This is almost completely benign, and happens when profiling.
2012-11-30	Fix uninitialised saturation flag	Thomas White

2012-11-30	Calculate minimum and maximum 1/d without iterating over every pixel	Thomas White

2012-11-30	check_hkl: Take forbidden reflections into account when calculating completeness	Thomas White

2012-11-29	indexamajig: Add --no-revalidate and update manpage	Thomas White

2012-11-29	indexamajig: Add --use-saturated	Thomas White

2012-11-29	Suppress "Couldn't sort reflections" message when there are no predicted peaks	Thomas White

2012-11-29	indexamajig: Add --integrate-saturated	Thomas White

2012-11-23	compare_hkl: Actually use --rmin/rmax	Thomas White
	Previously, they were just used to filter out reflections outside the resolution range, and the bins would be calculated from the resolution limits of whatever was left. Now, the given values are used exactly for calculating the bins.
2012-11-21	Show error information if forkpty() fails	Thomas White

2012-11-12	Use given HDF5 path when checking for it in configure	Thomas White

2012-11-06	Check for HDF5 library (earlier)	Thomas White

2012-10-29	Add new script: scripts/peak-intensity	Thomas White

2012-10-22	Fix argument to add_symop()	Thomas White

2012-10-22	Formatting	Thomas White

2012-10-22	indexamajig: Validate (re-integrate, check bad regions etc) peaks from HDF5	Thomas White

2012-10-22	Fix (still) broken bad rectangle test	Thomas White

2012-10-22	Update .gitignore	Thomas White

2012-10-22	Kick powder_plot out (to crystfel-programs)	Thomas White

2012-10-21	indexamajig: Record number of saturated reflections in stream	Thomas White

2012-10-21	hdfsee: Rationalise colour scale calculation, ignore max_adu	Thomas White

2012-10-20	Merge branch 'master' of ssh://git.bitwiz.org.uk/crystfel	Thomas White

2012-10-20	integrate_peak(): Restore check for bad region	Thomas White
	This fixes a regression introduced by ad2c84d0, predating the initial CrystFEL release.
2012-10-20	Not actually deprecated (yet)	Thomas White

2012-10-20	Remove unused variable	Thomas White

2012-10-20	Fussiness	Thomas White

2012-10-20	Merge remote-tracking branch 'bitwiz/nadia/minorthings'	Thomas White

2012-10-20	Update documentation	Thomas White

2012-10-20	Check for nonsensical value of lambda (too high) in HDF5	Nadia Zatsepin

2012-10-20	indexamajig: Don't load unit cell if none given	Thomas White
	This fixes some incorrect behaviour introduced by c7712c20.
2012-10-20	Extreme fussiness	Thomas White

2012-10-20	Update documentation	Thomas White

2012-10-19	Don't predict systematically absent reflections	Thomas White
	D'oh
2012-10-19	Update a comment	Thomas White

2012-10-19	Convert SymOpList to use IntegerMatrix	Thomas White
	This simplifies things a lot
2012-10-19	Update .gitignore	Thomas White

2012-10-19	Add useful comments	Thomas White