CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2015-06-19	Update ChangeLog	Thomas White

2015-06-19	Tidy up new MOSFLM code	Thomas White

2015-06-19	Send prior cell information to MOSFLM.	Takanori Nakane
	Prior-cell algorithm will be available in the next public relase of MOSFLM. (Old version of MOSFLM simply ignores prior-cell keywords so that this change doesn't do any harm)
2015-06-19	Remove old code/formatting	Thomas White

2015-06-19	Update docs	Thomas White

2015-06-19	Compile asdf only if FFTW is available	Thomas White

2015-06-19	Remove ReAx and GrainSpotter	Thomas White
	Neither of these ever really worked, and better algorithms exist now.
2015-06-18	Small tidying up for asdf	Thomas White

2015-06-18	Merge branch 'tolstikova/dirax'	Thomas White
	Conflicts: libcrystfel/src/index.h
2015-06-18	Fix bug in cell refinement	Alexandra Tolstikova

2015-06-18	Replace semaphore with a mutex	Thomas White
	A mutex (in a shared memory segment) is the correct synchronisation primitive here. I had confused myself...
2015-06-17	Check c->n after cell reduction	Alexandra Tolstikova

2015-06-17	Use a POSIX semaphore for synchronising terminal access during indexing	Thomas White
	Nice side-effect: indexamajig -j and --int-diag can now be used together
2015-06-17	Fix fft in[N] array subscript calculation	Alexandra Tolstikova

2015-06-16	partialator: Fix rejection bugs	Thomas White

2015-06-16	Check malloc return values	Alexandra Tolstikova

2015-06-16	pattern_sim: Update documentation and messages	Thomas White

2015-06-16	partialator: Improve rejection	Thomas White

2015-06-15	Remove mistakenly committed empty file	Thomas White

2015-06-15	ambigator: Change order of checking command line options	Thomas White
	This allows a useful possibility of using only -y/-w to calculate a left coset decomposition.
2015-06-11	Fixes to syntax of events.h header file	Valerio mariani

2015-06-11	Fixes for connected panel distance bugs	Valerio mariani

2015-06-09	match_cell(): Tidy up error handling when given a bogus lattice type	Thomas White

2015-06-08	Disable error maps if cairo and gtk are not available	Valerio mariani

2015-05-27	Add detector_has_clen_references()	Thomas White

2015-05-19	Exclude bad crystals from pobs/pcalc graph	Thomas White

2015-05-19	Set default crystal resolution limit to infinity	Thomas White
	Makes much more sense than zero
2015-05-19	partialator: Show initial and final residuals (including free)	Thomas White

2015-05-19	Add free residual and convergence check	Thomas White

2015-05-19	Debugging stuff	Thomas White

2015-05-19	partialator: Add cross-validation pobs/pcalc graph	Thomas White

2015-05-19	Add {get,set}_flag()	Thomas White

2015-05-19	Strip out scaling report stuff	Thomas White

2015-05-19	Fix R and div gradients	Thomas White

2015-05-19	s/lsq_intensities/merge_intensities/	Thomas White

2015-05-19	Strip out old scaling code	Thomas White

2015-05-19	Formatting	Thomas White

2015-05-19	partialator: Add --push-res	Thomas White

2015-05-19	SPOT enforcement	Thomas White

2015-05-19	Merge reflections up to resolution cutoff	Thomas White

2015-05-19	Remove status code for "lost too many reflections"	Thomas White
	This can't happen any more
2015-05-19	Refuse to refine any crystal with fewer data points than parameters	Thomas White

2015-05-19	Refuse all nan shifts	Thomas White

2015-05-19	p gradients	Thomas White

2015-05-19	Don't attempt to calculate detector position without detector structure	Thomas White
	... even if we are updating a previous reflection
2015-05-19	Set panel when reading reflections from stream	Thomas White

2015-05-19	More debugging / logarithm stuff	Thomas White

2015-05-19	Gradients for logarithmic scaling	Thomas White

2015-05-19	partialator: Output split merged reflection lists	Thomas White

2015-05-19	Remove debugging stuff	Thomas White