| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2017-09-15 | Simplify indexing options | Thomas White | |
| mosflm-cell-nolatt-multi-refine-bad-retry.... it's all getting a bit too much. This commit removes all the options from the indexing methods except for the prior information flags (cell/nocell and latt/nolatt). All the other options are now given at the top level with new indexamajig options, e.g. --no-multi and --no-retry. They are applied to all the methods, with no option to (say) use retry for one method and not for another. This also makes the "peak alignment test" default to OFF, and multi-lattice indexing ON. I think that the prediction refinement does a good enough job of checking the validity of indexing solutions, allowing us to turn off the alignment check which filters out most multi-lattice solutions. | |||
| 2017-09-15 | Fix uninitialised peak counts (for info in stream only) | Thomas White | |
| 2017-09-07 | Use compare_cells() for multi-lattice indexing | Thomas White | |
| 2017-09-07 | remove_flagged_crystals(): Return the number of crystals removed | Thomas White | |
| 2017-09-07 | Add compare_cells() (and use it in whirligig) | Thomas White | |
| 2017-09-07 | Add scripts/peakogram-stream to Makefile.am | Thomas White | |
| 2017-09-06 | tests/transformation_check: Check lots more things | Thomas White | |
| 2017-09-05 | cell_explorer: Display number of matching cells (on terminal) | Thomas White | |
| 2017-09-04 | pattern_sim: Add crystal orientation and basis vectors | Thomas White | |
| 2017-08-31 | Set first argument when running external indexing programs | Thomas White | |
| This makes sure they have names in process displays. | |||
| 2017-08-31 | setup_indexing(): Honour no_refine | Thomas White | |
| Fixes a regression caused by 61565336125, which broke indexamajig --no-refine. | |||
| 2017-08-09 | partial_sim: Add missing bracket in parameter list | Thomas White | |
| 2017-08-09 | Fix extra bracket in configure.ac | Thomas White | |
| 2017-08-03 | configure: Fix option name for --with-cbflib | Thomas White | |
| 2017-07-25 | create-mtz: Tidy up create-mtz.temp.hkl file | Thomas White | |
| 2017-07-25 | Fix typo in author name | Thomas White | |
| Whoops. Sorry Suzuki-san! | |||
| 2017-07-24 | This is CrystFEL 0.6.30.6.3 | Thomas White | |
| 2017-07-24 | Update docs | Thomas White | |
| 2017-07-24 | Make struct taketwo_options const | Thomas White | |
| 2017-07-24 | Ensure TakeTwo arrays get freed | Thomas White | |
| 2017-07-24 | TakeTwo options again | Thomas White | |
| 2017-07-24 | Formatting/copyright dates | Thomas White | |
| 2017-07-21 | Tidy up some warnings | Thomas White | |
| 2017-07-21 | Fix option names for TakeTwo parameters | Thomas White | |
| 2017-07-21 | Add a warning about mask_file when mask is not set | Thomas White | |
| 2017-07-20 | indexamajig(1): Give default values for TakeTwo options | Thomas White | |
| 2017-07-20 | Merge branch 'taketwo' | Thomas White | |
| 2017-07-20 | Change units for TakeTwo parameters | Thomas White | |
| 2017-07-18 | Merge params code with whatever this git pull thingy contains because I ↵ | cppxfel | |
| didn't pull first. Merge branch 'taketwo' of ssh://git.bitwiz.org.uk/crystfel into taketwo | |||
| 2017-07-18 | Crashy for unknown reason, but have added the code for using custom params. | cppxfel | |
| 2017-07-07 | Update ChangeLog | Thomas White | |
| 2017-07-07 | Convert angle_tol to radians | Thomas White | |
| 2017-07-07 | Documentation for TakeTwo indexamajig options | Thomas White | |
| 2017-07-06 | indexamajig: Add TakeTwo-specific options | Thomas White | |
| 2017-07-06 | Fix typo | Thomas White | |
| 2017-07-06 | Merge branch 'master' into taketwo | Thomas White | |
| 2017-07-06 | Indexing engine private pointers should be void * | Thomas White | |
| 2017-07-06 | Remove unnecessary headers and move an include | Thomas White | |
| 2017-07-06 | Use void pointers for indexing engine private stuff | Thomas White | |
| 2017-07-06 | Update docs | Thomas White | |
| 2017-07-06 | Temporary fix for the geomptimiser not being able to optimize whole quadrants | Valerio Mariani | |
| 2017-07-06 | Update to peakfinder8, with bug fixed and new functionality. Code synced ↵ | Valerio Mariani | |
| with OnDA and Oleksandr's programs | |||
| 2017-07-05 | Update docs | Thomas White | |
| 2017-07-05 | Rearrange quaternion declarations so that gtk-doc can cope | Thomas White | |
| The utils file contains two gtk-doc sections, "utils" and "quaternion", with a change of section halfway through. It seems that gtk-doc doesn't like it if the declarations are all mixed together. | |||
| 2017-07-05 | Shoved a bunch of the stuff being passed from function to function into ↵ | cppxfel | |
| TakeTwoCell, and shoved gsl_vector allocation into it as well to reduce alloc events | |||
| 2017-07-04 | Add a missing newline | Thomas White | |
| 2017-07-04 | Switch CBF support on by default | Thomas White | |
| 2017-07-04 | pattern_sim: Try all OpenCL platforms to find one with a GPU device | Thomas White | |
| 2017-07-04 | Check for CBF headers, even if they're somewhere weird | Thomas White | |
| 2017-07-01 | Adding a cutoff for maximum allowed vectors (100,000) to stop Tom's computer ↵ | cppxfel | |
| (and others) falling apart again. | |||
 |
index : CrystFEL | |
| Data processing for serial crystallography | Thomas White |
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