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AgeCommit message (Collapse)Author
2019-05-08Add new xgandalf optionsYaroslav Gevorkov
2019-05-07Don't try to build API docs unless DOXYGEN_FOUNDThomas White
2019-05-07Merge branch 'tom/doxygen'Thomas White
2019-05-07Remove intmat_set_all_3x3()Thomas White
2019-05-07Add CrystFEL version (including API revision) directly into Doxygen main pageThomas White
2019-05-07Update all source code comments to Doxygen formatThomas White
2019-05-07Main and coding standard pagesThomas White
2019-05-07Add CMake stuff for DoxygenThomas White
2019-05-07Remove old documentation stuffThomas White
2019-05-07Move spectrum type enum to pattern_sim.cThomas White
2019-04-16Clean up residual CBFlib stuffThomas White
2019-04-16Recognise (if not handle) all CBF formatsThomas White
2019-04-16Basic CBF reader with byte offset decompressionThomas White
2019-04-15Strip ouf CBFlib referencesThomas White
2019-04-12move-entire-detector: Add z directionThomas White
2019-04-10cell_explorer: Exclude cells when centering type is set to greyThomas White
This is more useful than just changing the colours. Fixes CRYS-224.
2019-04-09cell_explorer: Initialise scd.enforced_cell to NULLThomas White
2019-04-05compare_reindexed_cell_parameters: Require lattice to be primitive unless ↵Thomas White
csl set
2019-04-05cell_tool: Add --cslThomas White
2019-04-05cell_explorer: Add enforcement of lattice type restrictions on cell parametersThomas White
2019-04-04cell_explorer: Remove accelerator from "Save histogram data" menu itemThomas White
2019-04-03Fix typoThomas White
2019-04-03cell_explorer: Complain about unknown centeringThomas White
2019-04-03hdfsee: Fix crash with no geometry fileThomas White
2019-04-03Consider pixel as bad if its value is NaN or infinityThomas White
2019-04-02compare_reindexed_cell_parameters: Bail out when there are no candidate vectorsThomas White
2019-04-02Update crystfel_geometry(5)Thomas White
2019-03-26Fix order of matrix operations in compare_reindexed_cell_parameters()Thomas White
2019-03-22cell_explorer: Add option to save histogram dataThomas White
2019-03-20Fix matrix conventions for symmetry operationsThomas White
2019-03-20Merge branch 'tom/transformations'Thomas White
2019-03-18FormattingThomas White
2019-03-18hdfsee: Use a fresh detector geometry structure each time a new image is loadedThomas White
If the clen is a literal number, AND there's a coffset, the coffset will be added every time the image data is loaded. Now, it'll start from scratch.
2019-03-15extract-geom: Don't add extra newlinesThomas White
2019-03-13cell_transform_rational: Complain if matrix is singularThomas White
2019-03-13determine_centering: Check 1,1,1 in both directionsThomas White
The original centering must be able to provide a lattice point for 1,1,1 in the new centering. The new centering's 1,1,1 point must also map to a lattice point in the original centering. Note that it's no use checking 0,0,0, because it'll just be a load of zeroes.
2019-03-13cell_tool: Reject singular transformation matrixThomas White
2019-03-13cell_tool --transform: Write output cellThomas White
2019-03-13cell_tool: Accept unconventional cellThomas White
2019-03-13validate_cell: Allow to tell the difference between serious problems and ↵Thomas White
warnings
2019-03-13Remove intmat_solve_rationalThomas White
Not used anywhere
2019-03-13Rename m to P, to match documentation (including ITA)Thomas White
2019-03-13Rename rtnl_mtx_solve and rtnl_mtx_mult to make their purpose clearerThomas White
2019-03-13Fix matrix notation in symmetry operationsThomas White
2019-03-12Rename intmat_intvec_mult to transform_indicesThomas White
2019-03-12Get rid of two unused functionsThomas White
2019-03-12TakeTwo: Restore correct matrix multiplication for solutionThomas White
2019-03-11TakeTwo: take change in IntegerMatrix notation into accountThomas White
2019-03-11Remove commented codeThomas White
2019-03-11Get rid of cell_transform_gsl_reciprocal()Thomas White
It's confusing to have matrices acting on both real and reciprocal vectors. Let's standardise instead on transformations always applying to real-space cells. It was only used in one place.
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