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2020-07-29Actually get rid of hdf5-fileThomas White
2020-07-29Convert make_pixelmap to DataTemplateThomas White
NB The coffset is no longer written to the HDF5 file. This was a terrible hack anyway. The resolution field is just as bad, but as least easy to get from the detgeom.
2020-07-29Remove "struct detector" completely, part IThomas White
record_image has been moved to pattern_sim.c
2020-07-29Allow units in "clen" geometry file directiveThomas White
2020-07-29chomp: Don't measure length of string every iterationThomas White
2020-07-29Less circuitous string lexxing in geometry parserThomas White
2020-07-29assplode_algebraic: Ignore spacesThomas White
2020-07-29Move HDF5 and CBF stuff into separate filesThomas White
2020-07-29Add include guards and warning commentThomas White
2020-07-29Add missing header installationThomas White
2020-07-29image_free: Free detgeom as wellThomas White
NB Don't free the old "detector" struct. This has different semantics: Detgeom is allocated when the image is created (e.g. by loading a file). Detector is usually owned by someone else.
2020-07-29Convert more bits to detgeomThomas White
2020-07-29Add detgeom_freeThomas White
2020-07-29Fix dimension allocation in load_hdf5_hyperslabThomas White
2020-07-29Fix build without Msgpack/ZMQThomas White
2020-07-29Temporarily disable partial_sim, pattern_sim and geoptimiserThomas White
2020-07-29Add missing initialisationThomas White
2020-07-29Convert stream to DataTemplateThomas White
2020-07-29Convert make_BgMask to detgeomThomas White
2020-07-29Remove image_reflection_closestThomas White
Not used anywhere!
2020-07-29Convert prediction gradients to detgeomThomas White
2020-07-29Convert prediction and integration to detgeomThomas White
2020-07-29Convert map_all_peaks to detgeomThomas White
2020-07-29free_event_list: Handle NULL listThomas White
2020-07-29Convert estimate_peak_resolution to detgeomThomas White
2020-07-29Get rid of imagefile_field_list and stuff_from_streamThomas White
The only place this is used is in geoptimiser, to get the average_camera_length, itself a very bad solution.
2020-07-29Port indexamajig to new API, part IIThomas White
This also removes a large chunk of legacy code
2020-07-29list_events: Convert to DataTemplateThomas White
2020-07-29Port indexamajig to new API, part IThomas White
2020-07-29Deprecation markersThomas White
2020-07-29initialize_filename_plus_event: Check for NULLThomas White
2020-07-29Put brackets round values of bad pixelsThomas White
2020-07-29Fix CXI peak loading in new APIThomas White
2020-07-29Pass HDF5 path down to load_hdf5_hyperslab()Thomas White
2020-07-29Allow skipping placeholders when loading from HDF5Thomas White
This allows a static mask as a multi-dimensional array in a multi-event file, for example: data: { 148, 124, 1000, 16 } = { fs, ss, eventnum, panelnum } mask: { 148, 124, 16 } = { fs, ss, panelnum }
2020-07-29Show event ID in GUIThomas White
2020-07-29Expand event listThomas White
2020-07-29Add image_expand_frames()Thomas White
2020-07-29Shut down indexamajig process on exitThomas White
2020-07-29Remove hdfsee manual pageThomas White
2020-07-29Set "Show peaks" toggle after loading projectThomas White
2020-07-29Signal the entire process group to end indexamajigThomas White
Otherwise, subprocesses carry on regardless and become zombies.
2020-07-29indexamajig: Run in own process groupThomas White
Normally, the shell puts indexamajig into its own process group, so that the entire program (including subprocesses) can be killed easily. However, this doesn't happen when running from the GUI. So, it needs to be done manually.
2020-07-29Don't bother creating pipes that aren't usedThomas White
2020-07-29Remove info bar when indexamajig exitsThomas White
2020-07-29Better way to do subprocessesThomas White
2020-07-29Feedback when saving sessionThomas White
2020-07-29Load/save show_peaksThomas White
2020-07-29Confirm exit and save projectThomas White
2020-07-29Implement save_project()Thomas White
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