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2013-01-04compare_hkl: Add --intensity-shellsThomas White
2013-01-04integrate_peak(): check that 'saturated' isn't NULL before usingThomas White
Fixes a segfault
2012-12-14Beam and detector geometry don't need to be copiedThomas White
The did when this was all done with threads, but with separate processes each worker has its own copy of the structure already. It can be updated after every image and freed at the end.
2012-12-14WhitespaceThomas White
2012-12-13more user options for beam photon energyChun Hong Yoon
2012-12-05WhitespaceThomas White
2012-12-05process_hkl: Add --min-measurementsThomas White
2012-12-05Add a FIXMEThomas White
2012-12-05Fix a typo in process_hkl(1)Thomas White
2012-12-04scripts/gen-sfs-ano: Check exit status of get_hklThomas White
2012-12-04get_hkl: Fix a segfaultThomas White
2012-12-03Remove data dir from INCLUDESThomas White
This was needed before, but not any more.
2012-12-03Add crystfel.pc file for pkg-configThomas White
2012-12-03Treat SNR=nan (=0/0) as below any SNR thresholdThomas White
2012-12-03FussinessThomas White
2012-12-03Use a less scary message for EINTRThomas White
This is almost completely benign, and happens when profiling.
2012-11-30Fix uninitialised saturation flagThomas White
2012-11-30Calculate minimum and maximum 1/d without iterating over every pixelThomas White
2012-11-30check_hkl: Take forbidden reflections into account when calculating completenessThomas White
2012-11-29indexamajig: Add --no-revalidate and update manpageThomas White
2012-11-29indexamajig: Add --use-saturatedThomas White
2012-11-29Suppress "Couldn't sort reflections" message when there are no predicted peaksThomas White
2012-11-29indexamajig: Add --integrate-saturatedThomas White
2012-11-23compare_hkl: Actually use --rmin/rmaxThomas White
Previously, they were just used to filter out reflections outside the resolution range, and the bins would be calculated from the resolution limits of whatever was left. Now, the given values are used exactly for calculating the bins.
2012-11-21Show error information if forkpty() failsThomas White
2012-11-12Use given HDF5 path when checking for it in configureThomas White
2012-11-06Check for HDF5 library (earlier)Thomas White
2012-10-29Add new script: scripts/peak-intensityThomas White
2012-10-22Fix argument to add_symop()Thomas White
2012-10-22FormattingThomas White
2012-10-22indexamajig: Validate (re-integrate, check bad regions etc) peaks from HDF5Thomas White
2012-10-22Fix (still) broken bad rectangle testThomas White
2012-10-22Update .gitignoreThomas White
2012-10-22Kick powder_plot out (to crystfel-programs)Thomas White
2012-10-21indexamajig: Record number of saturated reflections in streamThomas White
2012-10-21hdfsee: Rationalise colour scale calculation, ignore max_aduThomas White
2012-10-20Merge branch 'master' of ssh://git.bitwiz.org.uk/crystfelThomas White
2012-10-20integrate_peak(): Restore check for bad regionThomas White
This fixes a regression introduced by ad2c84d0, predating the initial CrystFEL release.
2012-10-20Not actually deprecated (yet)Thomas White
2012-10-20Remove unused variableThomas White
2012-10-20FussinessThomas White
2012-10-20Merge remote-tracking branch 'bitwiz/nadia/minorthings'Thomas White
2012-10-20Update documentationThomas White
2012-10-20Check for nonsensical value of lambda (too high) in HDF5Nadia Zatsepin
2012-10-20indexamajig: Don't load unit cell if none givenThomas White
This fixes some incorrect behaviour introduced by c7712c20.
2012-10-20Extreme fussinessThomas White
2012-10-20Update documentationThomas White
2012-10-19Don't predict systematically absent reflectionsThomas White
D'oh
2012-10-19Update a commentThomas White
2012-10-19Convert SymOpList to use IntegerMatrixThomas White
This simplifies things a lot