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2021-06-22GUI: Remove old debugging watchpointThomas White
2021-06-22CrystFELImageView: Rearrange reflection coloursThomas White
Smaller numbers of crystals are more common, so it's better for the second crystal to be something very distinct from the peak search colour.
2021-06-22Update INSTALL.mdThomas White
2021-06-22Add string terminator for fixed-length HDF5 strings from arraysThomas White
2021-06-21Restore HDF5 string handlingThomas White
Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/36
2021-06-21image_cache_header_str: Reject strings containing newlinesThomas White
2021-06-21INSTALL.md: Mention CentOSThomas White
2021-06-21Move installation documentation to INSTALL.mdThomas White
2021-06-17GUI: Add a tooltipThomas White
2021-06-17CMake: Use ZMQ_LDFLAGS instead of ZMQ_LIBRARIESThomas White
2021-06-16GUI: Warn if chunk can't be loaded from streamThomas White
2021-06-16stream_read_chunk: Bail out if detgeom can't be createdThomas White
2021-06-16Add DST_NONE for 'no data source' (e.g. image came from stream)Thomas White
2021-06-16FussinessThomas White
2021-06-15Meson: Add -DH5O_GET_INFO_BY_IDX1 to match CMakeThomas White
2021-06-14Small update to CONTRIBUTING.mdThomas White
2021-05-28GUI: Store relative paths of resultsThomas White
This allows project folders to be relocated more easily. At the same time, I fixed the weird ownership semantics of add_indexing_result and add_merge_result. Fixes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/31
2021-05-28Pass errors back when retrieving values for wavelength etcThomas White
Big improvement on just sending NAN back. Fixes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/37
2021-05-25Fix dummy prototype for im_zmq_connectThomas White
2021-05-19GUI: Add button to reset FoM resolution range to entire dataThomas White
Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/11
2021-05-19GUI: Increase size of FoM min resolution boxThomas White
2021-05-18Update online.rstThomas White
2021-05-18Fuss over electrons.rstThomas White
2021-05-17Fix RST backticksThomas White
2021-05-17Add 'article' about electron diffractionThomas White
2021-05-17Resolve FIXMEs and TODOsThomas White
Prompted by the article linked below, for each FIXME/TODO I've either referenced an issue in the tracker, or removed it if it's not worth fixing. https://schleiss.io/plotting-source-code-todos-for-open-source-projects
2021-05-17Mosflm: Remove dead codeThomas White
This removes some old stub code. There doesn't seem to be a big need for doing what the FIXME suggests.
2021-05-17Improve CONTRIBUTING.mdThomas White
2021-05-17GUI: Improve error handling for default_projectThomas White
2021-05-12Don't assume that headers to be copied are floatsThomas White
2021-05-12FussinessThomas White
2021-05-12Fix build without MsgPack (again)Thomas White
2021-05-12Fix build without MsgPackThomas White
2021-05-12Rework header caching layerThomas White
This clears up multiple layering violations which were starting to get in the way. It enables "string" headers to be stored directly, and it will make it much simpler to add new header types in the future. Along the way, this changes all the floating point header stuff to use double precision. This is needed for EuXFEL event IDs. Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/34
2021-05-12Fix convert_int and add convert_floatThomas White
convert_int was using strtod. Whoops!
2021-05-12MsgPack: Fix a silly copy/paste errorThomas White
2021-05-11indexamajig: Put cell tolerances and pk/int radii into separate objectsThomas White
Rationale: it makes the JSON structure a bit more logical, and enables things like the following: set_of_params_1.integration.radii == set_of_params_2.integration.radii params.peaksearch.radii == params.integration.radii Previously, these would have required multiple comparisons.
2021-05-11Set panel for bad region when there is only one panelThomas White
When there is only one panel, we can safely assume that fs/ss bad regions refer to it without it being stated in the geometry file. This allows some older Pilatus geometry files to be used without complaints. A further improvement would be to determine the panel when all the data comes from one "slab" so the panel is still ambiguous. However, on further thought it seems like a lot of work to do this reliably in all cases. I'm not even sure that this case in particular is causing anyone problems. Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/32
2021-05-11GUI: Fix loading of merging parameters from project fileThomas White
Apparently, I can't count.
2021-05-11GUI: Fix checkbox logic in CrystFELMergeOptsThomas White
2021-05-11GUI: Ensure that streams get re-scanned after job terminationThomas White
Previously, they would not get scanned because no job was running. We need one more scan after a job exits to make sure everything is up to date.
2021-05-11Add the 'real' implementation of CrystFELSymmetrySelectorThomas White
Closes: https://gitlab.desy.de/thomas.white/crystfel/-/issues/13
2021-05-11Add set_combo_id()Thomas White
2021-05-07Add deselect_when_active()Thomas White
2021-05-07Add has_unique_axis()Thomas White
2021-05-07GUI: Add missing initialisation/load/save for ambi.backendThomas White
2021-05-07MsgPack: Warn if dtempl->peak_list is NULLThomas White
2021-05-07MsgPack: Use the right pointer for "bin" keysThomas White
2021-05-07MsgPack: Use top-level object directly if it is a mapThomas White
2021-05-05indexamajig: Add --zmq-requestThomas White
This (re-)adds the ability to get data via a request/reply socket. See afcb7b568947c for when it was removed.
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