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AgeCommit message (Collapse)Author
2012-07-22Add write_detector_geometry() to detector.hThomas White
2012-07-03Fix the detection of an actual phase value in a reflection listThomas White
2012-06-28Warn user if any peaks were badrow culledThomas White
2012-06-28Don't lie about the number of badrow culled peaksThomas White
2012-06-28Remove peak_sep from detector geometry file, use ir_inn insteadThomas White
2012-06-21More fussinessThomas White
2012-06-21Fix skip_some_files()Thomas White
Without chomp(), the string comparison never works.
2012-06-21More fussinessThomas White
2012-06-21Update authorshipThomas White
2012-06-20Revert "Remove deprecated SNR cutoff"Thomas White
This reverts commit ae51e75490daf47e2deefe83e72a1f5c092fa023.
2012-06-20FussinessThomas White
2012-06-20Merge remote-tracking branch 'bitwiz/ken/int_noPkBg'Thomas White
2012-06-13Mask peaks in the background calculation of integrate_peak.Kenneth Beyerlein
2012-06-07Use max_adu only for final integrationThomas White
Saturated pixels seem to be OK during initial peak search
2012-05-30Fix previous commitThomas White
2012-05-30FormattingThomas White
2012-05-21ADU threshold is on pixel value, not photon-bg subtracted versionThomas White
2012-05-21Write max_adu out to saved geometry fileThomas White
2012-05-21ADU limit in peak integrationThomas White
2012-04-26Update the peak coordinates when doing --closer-peakThomas White
This should make it much more obvious (via check-near-bragg) when the peak positions are wrong.
2012-04-26Single point of truth for indices when sorting reflectionsThomas White
2012-04-26indexamajig: Make --no-closer-peak the defaultThomas White
2012-04-26Remove PEAK_CLOSE (not used for anything)Thomas White
2012-04-19FormattingThomas White
2012-04-19Remove check for rlow > rhighThomas White
I'm happy that there are no gremlins here, now. This happens only for 000, where rlow and rhigh both go to zero. It doesn't make sense to have a special check for the condition.
2012-04-19Simplify prediction criterionThomas White
2012-04-10Fix maximum index calculationThomas White
2012-04-05Remove old commentThomas White
2012-04-05Fix partiality calculationThomas White
2012-04-05Improved spot predictionThomas White
2012-04-05Fix iteration bounds for peak integrationThomas White
2012-03-29integrate_peak() should be staticThomas White
2012-03-26Make sure 'diffracting_resolution' is setThomas White
I'm sure I've fixed this bug many times before...
2012-03-26Fix find_panel() (again)Thomas White
This fixes a not-so-subtle bug introduced by 289c8a77c252e080d4d4086b848ea8fdcb604147.
2012-03-23Fix hdf5_write_image()Thomas White
2012-03-23Remove unnecessary max_sizeThomas White
2012-03-23Add new function hdf5_write_image() to include all relevant information in ↵Thomas White
the file
2012-03-19Fix arithmetic subtlety in find_panel()Thomas White
2012-03-13FormattingThomas White
2012-03-13Fix strange behaviour of add_refl_to_list()Thomas White
2012-03-12Remove unused variablesThomas White
2012-03-12Update copyright notices to show actual contribution yearsThomas White
2012-03-09Remove integr_radius field from detector descriptionThomas White
2012-03-09Update licence notices in line with recommendations from TTThomas White
2012-03-09"Final" tweaks to integration and testsThomas White
2012-03-09Compile libcrystfel with -Wall, fix warningsThomas White
2012-03-09indexamajig: Take integration radii on command lineThomas White
2012-03-09Updates for ADU per eVThomas White
2012-03-09Use ADU per eV in geometry file, rather than ADU per photon in beam fileThomas White
Conflicts: src/get_hkl.c tests/morphology_check.c
2012-03-09Update copyrightThomas White
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