CrystFEL - Data processing for serial crystallography

Age	Commit message (Collapse)	Author
2013-01-30	Update copyright dates	Thomas White

2013-01-30	Peak integration changes	Thomas White

2013-01-30	Stream changes	Thomas White

2013-01-28	Tried to fix errors in xds.c	Cornelius Gati

2013-01-28	Changed index.c/.h	Cornelius Gati

2013-01-28	Copied grainspotter.c/.h to xds.c/.h, deleted write_gve and replaced it with ↵	Cornelius Gati
	write_spt from mosflm.c
2013-01-28	More changes to geometry.c	Thomas White

2013-01-28	Update geometry.c	Thomas White

2013-01-28	First bit of Crystal	Thomas White

2013-01-14	Formatting	Thomas White

2013-01-10	Fix documentation	Thomas White

2013-01-10	indexamajig: Add --integrate-found	Thomas White

2013-01-09	Matrix reading stuff	Thomas White

2013-01-09	GrainSpotter interface (works)	Thomas White

2013-01-08	Skeleton indexing method for GrainSpotter	Thomas White

2013-01-04	Tidy up documentation	Thomas White

2013-01-04	integrate_peak(): check that 'saturated' isn't NULL before using	Thomas White
	Fixes a segfault
2012-12-14	Beam and detector geometry don't need to be copied	Thomas White
	The did when this was all done with threads, but with separate processes each worker has its own copy of the structure already. It can be updated after every image and freed at the end.
2012-12-14	Whitespace	Thomas White

2012-12-13	more user options for beam photon energy	Chun Hong Yoon

2012-12-05	Whitespace	Thomas White

2012-12-03	Remove data dir from INCLUDES	Thomas White
	This was needed before, but not any more.
2012-12-03	Add crystfel.pc file for pkg-config	Thomas White

2012-12-03	Treat SNR=nan (=0/0) as below any SNR threshold	Thomas White

2012-12-03	Fussiness	Thomas White

2012-12-03	Use a less scary message for EINTR	Thomas White
	This is almost completely benign, and happens when profiling.
2012-11-30	Fix uninitialised saturation flag	Thomas White

2012-11-30	Calculate minimum and maximum 1/d without iterating over every pixel	Thomas White

2012-11-29	indexamajig: Add --use-saturated	Thomas White

2012-11-29	Suppress "Couldn't sort reflections" message when there are no predicted peaks	Thomas White

2012-11-29	indexamajig: Add --integrate-saturated	Thomas White

2012-11-21	Show error information if forkpty() fails	Thomas White

2012-10-22	Fix argument to add_symop()	Thomas White

2012-10-22	indexamajig: Validate (re-integrate, check bad regions etc) peaks from HDF5	Thomas White

2012-10-22	Fix (still) broken bad rectangle test	Thomas White

2012-10-21	indexamajig: Record number of saturated reflections in stream	Thomas White

2012-10-20	Merge branch 'master' of ssh://git.bitwiz.org.uk/crystfel	Thomas White

2012-10-20	integrate_peak(): Restore check for bad region	Thomas White
	This fixes a regression introduced by ad2c84d0, predating the initial CrystFEL release.
2012-10-20	Not actually deprecated (yet)	Thomas White

2012-10-20	Remove unused variable	Thomas White

2012-10-20	Update documentation	Thomas White

2012-10-20	Extreme fussiness	Thomas White

2012-10-19	Don't predict systematically absent reflections	Thomas White
	D'oh
2012-10-19	Update a comment	Thomas White

2012-10-19	Convert SymOpList to use IntegerMatrix	Thomas White
	This simplifies things a lot
2012-10-19	Add useful comments	Thomas White

2012-10-19	Switch off INVERTX for MOSFLM	Thomas White

2012-10-19	Formatting	Thomas White

2012-10-17	describe_symmetry(): Don't attempt to display "i"	Thomas White
	It makes an invalid assumption about the setting
2012-10-17	describe_symmetry(): More faff	Thomas White