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2016-07-01Remove slab-relative coordinates from geoptimiserThomas White
2016-07-01geoptimiser: Use GSL median functionThomas White
2016-07-01Remove slab-relative coordinates from partial_sim and pattern_simThomas White
2016-05-13{check,compare}_hkl: Add warnings when using potentially silly option choicesThomas White
2016-05-12geoptimiser: Only do g_type_init() if HAVE_SAVE_TO_PNGThomas White
2016-03-22Workaround for CLOCK_MONOTONIC_RAW on old Linux (<2.6.28)Thomas White
2016-03-18cell_explorer: Switch font back to Serif (from Liberation Serif)Thomas White
This makes the Greek letters come up at SLAC.... again. Reverts 779d87eb08fa2b185c43a82814aecc0e1a00eef9.
2016-03-14Add SA_RESTART to signal handlersThomas White
Fixes corrupted output when heavily multi-processing.
2016-03-01indexamajig: Wall clock profilingThomas White
2016-02-23hdfsee: Fix panel/feature names in numbers windowThomas White
2016-02-09pattern_sim: Initialise stuff for powder HDF5Thomas White
2016-02-08FormattingThomas White
2016-02-05partialator: add --output-every-cycle option to write .hkl* and .params ↵Keitaro Yamashita
files in every cycle
2016-01-30indexamajig: Restore --no-refineThomas White
Adds yet another indexing option...
2016-01-29Perform prediction refinement straight after indexingThomas White
This allows indexing to be attempted again (either a new method or with "retry") if the prediction refinement fails, increasing overall indexing rate. Side-effect: there are some hoops which would need to be jumped through to store the profile radius before refinement and hence enable scripts/plot-predict-refine to work. For now, we'll ignore this as it's clear that the prediction refinement is working.
2016-01-08ambigator: Don't require -yThomas White
The manual says that -y 1 is the default.
2016-01-08Replace incorrect label in geoptimiserValerio Mariani
2016-01-06Rearrange columns in partialator.paramsThomas White
2016-01-06Print filename and event string in the partialator.params output fileValerio Mariani
2015-12-18Saturation map fixesThomas White
2015-12-17list_events: Handle broken event listThomas White
2015-12-13indexamajig: Restart fgets() in pump_chunk() if interrupted by system callThomas White
This fixes the occasional unterminated chunk found in the output.
2015-12-01hdfsee: Round panel transformations before passing them to CairoThomas White
This prevents the slight blurring of image data which happened before.
2015-11-27indexamajig: Write target unit cell into streamThomas White
2015-11-19Maximum number of iterations for scalingThomas White
2015-11-19partialator: Set default push-res to infinityThomas White
Not needed now that the scaling is more stable
2015-11-19Monitor average BThomas White
2015-11-19Count reflections in merge and scalingThomas White
2015-11-18Move B factor limit to general rejection functionThomas White
2015-11-18No free-flagged reflections in merge for scalingThomas White
2015-11-18Factorise get_locked_reflection()Thomas White
2015-11-18partialator: Scale (strictly) using strong reflections onlyThomas White
2015-11-18merge_intensities(): add use_weak optionThomas White
2015-11-17Make integration WITHOUT gradient background the defaultThomas White
2015-11-17Make gradient background fitting optionalThomas White
2015-11-13Fussiness (extreme)Thomas White
2015-11-13Avoid NULL dereference in some scenarios when there is no bad pixel maskThomas White
2015-11-13Fussiness/add a FIXMEThomas White
2015-11-06Remove unused definitionThomas White
2015-11-04pattern_sim: Fix obvious stupid bugThomas White
2015-11-03hdfsee: Restore TIFF outputThomas White
2015-11-03hdfsee: Restore ADSC outputThomas White
2015-11-03Merge branch 'tom/imagedata'Thomas White
2015-11-03Corrected logical mistake in computing panel distancesValerio Mariani
2015-10-30hdfsee: Fix crash when changing rigid group in calibration modeThomas White
The number of rigid groups overall is usually greater than the number of rigid groups in the current collection. Therefore, the "previous rg" function wrapped round to the wrong place.
2015-10-07Merge branch 'master' into tom/imagedataThomas White
2015-10-07FormattingThomas White
2015-10-07Fix a small memory leakThomas White
2015-10-07pattern_sim: Remove image->data (GPU only)Thomas White
2015-10-05hdfsee: Disable TIFF/ADSC output functionsThomas White
Need a better solution here: fix them or delete them
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