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2019-10-18indexamajig: Fix incorrect timeout logicThomas White
2019-10-17indexamajig: Shut down gracefully after failed image loadThomas White
2019-09-23Add missing initialisationThomas White
2019-09-23indexamajig: Stop program on option parsing errorThomas White
2019-09-23Get rid of "rescut" integration flagThomas White
Its behaviour is 100% covered by the push-res parameter, which can be set to infinity for no cutoff.
2019-09-23Merge branch 'tom/pinkindexer'Thomas White
2019-09-23indexamajig: Move 'profile' flag out of iargsThomas White
2019-09-23indexamajig: Restore --min-gradientThomas White
2019-09-20Add missing 'break'Thomas White
2019-09-20Delegate option processing for indexing methodsThomas White
Involves switching from getopt_long to argp. A big improvement!
2019-09-16Fix cell comparison logicThomas White
2019-09-12indexamajig: Get rid of --fix-bandwidth / use bandwidth from geometry fileThomas White
2019-09-12Increase indexing timeout when using pinkIndexerThomas White
2019-09-12Avoid duplication of beam and detector parameters for pinkIndexerThomas White
2019-09-12Fix header include pathThomas White
2019-09-12Format help items for pinkIndexerThomas White
2019-09-12WhitespaceThomas White
2019-09-12pinkIndexer: Formatting, and get rid of tmp_enumThomas White
2019-09-12Use hard-coded default bandwidth for pinkIndexerThomas White
(Temporarily)
2019-09-12Use +INFINITY instead of FLT_MAXThomas White
2019-09-12Add pinkIndexer interfaceYaroslav Gevorkov
2019-09-10indexamajig: Add --peaks=noneThomas White
2019-09-05process_hkl: Set kpred for all reflections to image valueThomas White
Since the prediction calculation isn't called by process_hkl (in contrast to partialator), a value must still be provided.
2019-09-05partialator: Correct polarisation after update_predictions()Thomas White
Polarisation correction needs kpred values.
2019-09-05Allow the polarsation correction to be completely disabledThomas White
2019-09-03Fix memory leak in event queueThomas White
2019-09-02Don't need separate wavelength for polarisation correctionThomas White
Can use kpred
2019-09-02process_hkl,partialator: Allow arbitrary direction and degree of polarisationThomas White
2019-08-29indexamajig: Remove --no-cell-combinationsThomas White
Also remove all the related API stuff. We now have a much better way of checking indexing results.
2019-08-28cell_explorer: Add a warningThomas White
2019-08-27cell_tool: Clarify interpretation of tolerancesThomas White
2019-08-26cell_tool: Just do all the comparisons, get rid of --cslThomas White
2019-08-22Tidy up comparison function definitionsThomas White
Especially, remove the last ltl/atl tolerance values.
2019-08-16Clarify cell vs reference in comparison functions. Also reindexed vs permutedThomas White
2019-08-16compare_cell_parameters and compare_reindexed_cell_parameters: Accept 6 ↵Thomas White
tolerances
2019-08-16indexamajig: Accept six values for unit cell toleranceThomas White
2019-08-01hdfsee: Fix 0.5 Angstrom resolution ringThomas White
2019-07-30Spectrum: Define Gaussian using area, not heightThomas White
2019-07-29Formatting/commentsThomas White
2019-07-24indexamajig: Free spectrum if it was generated for this imageThomas White
2019-07-24indexamajig: Set Gaussian spectrum if one is not providedThomas White
2019-07-22ambigator: Use three pre-defined resolution bins if no resolution limits are ↵Thomas White
given
2019-07-17zmq: Remove reference to image.num_peaksThomas White
See 636eb6116961296791bae35c40fd9438aa946827
2019-07-17Merge branch 'tom/zmq'Thomas White
2019-07-17partialator: Add "offset" model (Ewald sphere offset assuming monochromatic ↵Thomas White
beam)
2019-07-17partialator: Allow refinement of any partiality modelThomas White
2019-07-17Don't repeat scaling when refiningThomas White
This seems to be a major cause of "going off the rails", and the surfaces look reasonable (in fact, better) without it. Plus, if the user says --no-scale, there should be no scaling at all.
2019-07-17partialator: Use Spectrum APIThomas White
2019-07-17Comment out debugThomas White
2019-07-17Really Simple MinimiserThomas White
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