From 6a25a919a8a886f446089bd67e26132dbf46627e Mon Sep 17 00:00:00 2001 From: Thomas White Date: Mon, 24 Jul 2017 14:58:50 +0200 Subject: Update docs --- doc/man/indexamajig.1 | 4 ++++ libcrystfel/src/image.h | 8 +------- 2 files changed, 5 insertions(+), 7 deletions(-) diff --git a/doc/man/indexamajig.1 b/doc/man/indexamajig.1 index 64b22025..25065aed 100644 --- a/doc/man/indexamajig.1 +++ b/doc/man/indexamajig.1 @@ -80,6 +80,10 @@ The Felix indexer has been developed by Soeren Schmidt . To u .PD Invoke XDS, and use its REFIDX procedure to attempt to index the pattern. +.IP \fBtaketwo\fR +.PD +Use the TakeTwo algorithm. See Ginn et al., Acta Cryst. (2016). D72, 956-965. + .PP You can add one or more of the following to the above indexing methods: diff --git a/libcrystfel/src/image.h b/libcrystfel/src/image.h index 9719bb59..d7884e4c 100644 --- a/libcrystfel/src/image.h +++ b/libcrystfel/src/image.h @@ -173,13 +173,7 @@ struct beam_params * The field data contains the raw image data, if it * is currently available. The data might be available throughout the * processing of an experimental pattern, but it might not be available when - * simulating, scaling or merging patterns. Similarly, - * flags contains an array of the same dimensions - * as data to contain the bad pixel flags. - * twotheta likewise contains an array of 2*theta - * (scattering angle) values in radians, since these values are generated as a - * by-product of the scattering vector calculation and can be used later for - * calculating intensities from differential scattering cross sections. + * simulating, scaling or merging patterns. * * crystals is an array of %Crystal directly * returned by the low-level indexing system. n_crystals -- cgit v1.2.3