1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
|
/*
* detector.h
*
* Detector properties
*
* Copyright © 2012 Deutsches Elektronen-Synchrotron DESY,
* a research centre of the Helmholtz Association.
*
* Authors:
* 2009-2012 Thomas White <taw@physics.org>
* 2011 Richard Kirian <rkirian@asu.edu>
*
* This file is part of CrystFEL.
*
* CrystFEL is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* CrystFEL is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with CrystFEL. If not, see <http://www.gnu.org/licenses/>.
*
*/
#ifdef HAVE_CONFIG_H
#include <config.h>
#endif
#ifndef DETECTOR_H
#define DETECTOR_H
struct image;
struct hdfile;
#include "hdf5-file.h"
#include "image.h"
#ifdef __cplusplus
extern "C" {
#endif
struct panel
{
char name[1024]; /* Name for this panel */
int min_fs; /* Smallest FS value considered to be in the panel */
int max_fs; /* Largest FS value considered to be in this panel */
int min_ss; /* ... and so on */
int max_ss;
double cnx; /* Location of corner (min_fs,min_ss) in pixels */
double cny;
double coffset;
double clen; /* Camera length in metres */
char *clen_from;
double res; /* Resolution in pixels per metre */
char badrow; /* 'x' or 'y' */
int no_index; /* Don't index peaks in this panel if non-zero */
double peak_sep; /* Characteristic peak separation */
char *rigid_group; /* Rigid group, or -1 for none */
double adu_per_eV; /* Number of ADU per eV */
double fsx;
double fsy;
double ssx;
double ssy;
double xfs;
double yfs;
double xss;
double yss;
};
struct badregion
{
char name[1024];
double min_x;
double max_x;
double min_y;
double max_y;
};
struct detector
{
struct panel *panels;
int n_panels;
int max_fs;
int max_ss; /* Size of overall array needed, minus 1 */
struct badregion *bad;
int n_bad;
char *mask;
unsigned int mask_bad;
unsigned int mask_good;
char **rigid_groups;
int num_rigid_groups;
struct panel defaults;
};
extern struct rvec get_q(struct image *image, double fs, double ss,
double *ttp, double k);
extern struct rvec get_q_for_panel(struct panel *p, double fs, double ss,
double *ttp, double k);
extern double get_tt(struct image *image, double xs, double ys, int *err);
extern int in_bad_region(struct detector *det, double fs, double ss);
extern void record_image(struct image *image, int do_poisson);
extern struct panel *find_panel(struct detector *det, double fs, double ss);
extern int find_panel_number(struct detector *det, int fs, int ss);
extern struct detector *get_detector_geometry(const char *filename);
extern void free_detector_geometry(struct detector *det);
extern struct detector *simple_geometry(const struct image *image);
extern void get_pixel_extents(struct detector *det,
double *min_x, double *min_y,
double *max_x, double *max_y);
extern void fill_in_values(struct detector *det, struct hdfile *f);
extern struct detector *copy_geom(const struct detector *in);
extern int reverse_2d_mapping(double x, double y, double *pfs, double *pss,
struct detector *det);
extern double largest_q(struct image *image);
extern double smallest_q(struct image *image);
extern struct panel *find_panel_by_name(struct detector *det, const char *name);
#ifdef __cplusplus
}
#endif
#endif /* DETECTOR_H */
|
