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#!/bin/sh
PROCESS_HKL=$1
cat > second_merge_check.stream << EOF
CrystFEL stream format 2.1
Command line: indexamajig -i dummy.lst -o dummy.stream --kraken=prawn
----- Begin chunk -----
Image filename: dummy.h5
photon_energy_eV = 2000.0
--- Begin crystal
Cell parameters 27.74398 27.84377 16.90346 nm, 88.53688 91.11774 118.75944 deg
astar = -0.0283891 +0.0149254 -0.0257273 nm^-1
bstar = -0.0068281 +0.0403989 -0.0005196 nm^-1
cstar = +0.0406926 +0.0052233 -0.0426520 nm^-1
Reflections measured after indexing
h k l I phase sigma(I) counts fs/px ss/px
1 0 0 100.00 - 0.00 1 938.0 629.0
End of reflections
--- End crystal
----- End chunk -----
----- Begin chunk -----
Image filename: dummy.h5
photon_energy_eV = 2000.0
--- Begin crystal
Cell parameters 27.74398 27.84377 16.90346 nm, 88.53688 91.11774 118.75944 deg
astar = -0.0283891 +0.0149254 -0.0257273 nm^-1
bstar = -0.0068281 +0.0403989 -0.0005196 nm^-1
cstar = +0.0406926 +0.0052233 -0.0426520 nm^-1
Reflections measured after indexing
h k l I phase sigma(I) counts fs/px ss/px
-1 0 0 200.00 - 0.00 1 938.0 629.0
End of reflections
--- End crystal
----- End chunk -----
EOF
cat > second_merge_check_ans.hkl << EOF
CrystFEL reflection list version 2.0
Symmetry: -1
h k l I phase sigma(I) nmeas
1 0 0 150.00 - 35.36 2
EOF
$PROCESS_HKL -y -1 -i second_merge_check.stream -o second_merge_check.hkl --no-polarisation
if [ $? -ne 0 ]; then
exit 1;
fi
sed -n '/End of reflections/q;p' second_merge_check.hkl > tempS.hkl
mv tempS.hkl second_merge_check.hkl
diff second_merge_check.hkl second_merge_check_ans.hkl
if [ $? -ne 0 ]; then
exit 1
fi
rm -f second_merge_check.stream second_merge_check.hkl second_merge_check_ans.hkl
exit 0
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