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authorThomas White <taw@physics.org>2019-09-24 15:29:41 +0200
committerThomas White <taw@physics.org>2019-09-24 15:29:41 +0200
commit622ed418cc955fab261c75f7e89e478ec6d7ff33 (patch)
tree62c7f1c0d78c68f9a045215a527a9a7259665363 /files
parentac6aecf008b2a29088a7a4dbf445381b649bea8e (diff)
Work on actual demos
Diffstat (limited to 'files')
-rw-r--r--files/5HT2B.geom641
-rwxr-xr-xfiles/check-peak-detection153
-rw-r--r--files/files.lst5775
-rw-r--r--files/nocell.stream1324
-rw-r--r--files/peaks.stream1324
-rwxr-xr-xfiles/random-image16
6 files changed, 9233 insertions, 0 deletions
diff --git a/files/5HT2B.geom b/files/5HT2B.geom
new file mode 100644
index 0000000..f5df137
--- /dev/null
+++ b/files/5HT2B.geom
@@ -0,0 +1,641 @@
+adu_per_eV = 0.00105
+clen = /LCLS/detector0-EncoderValue
+coffset = 582.00e-3
+photon_energy = /LCLS/photon_energy_eV
+res = 9097.525473
+
+bad_thing/min_x = -390
+bad_thing/max_x = -270
+bad_thing/min_y = 820
+bad_thing/max_y = 890
+
+bad_sparkly/min_x = -220
+bad_sparkly/max_x = -180
+bad_sparkly/min_y = 30
+bad_sparkly/max_y = 235
+
+bad_squiggle/min_x = 80
+bad_squiggle/max_x = 180
+bad_squiggle/min_y = 595
+bad_squiggle/max_y = 640
+
+; The following lines define "rigid groups" which express the physical
+; construction of the detector. This is used when refining the detector
+; geometry.
+
+rigid_group_q0 = q0a0,q0a1,q0a2,q0a3,q0a4,q0a5,q0a6,q0a7,q0a8,q0a9,q0a10,q0a11,q0a12,q0a13,q0a14,q0a15
+rigid_group_q1 = q1a0,q1a1,q1a2,q1a3,q1a4,q1a5,q1a6,q1a7,q1a8,q1a9,q1a10,q1a11,q1a12,q1a13,q1a14,q1a15
+rigid_group_q2 = q2a0,q2a1,q2a2,q2a3,q2a4,q2a5,q2a6,q2a7,q2a8,q2a9,q2a10,q2a11,q2a12,q2a13,q2a14,q2a15
+rigid_group_q3 = q3a0,q3a1,q3a2,q3a3,q3a4,q3a5,q3a6,q3a7,q3a8,q3a9,q3a10,q3a11,q3a12,q3a13,q3a14,q3a15
+
+rigid_group_a0 = q0a0,q0a1
+rigid_group_a1 = q0a2,q0a3
+rigid_group_a2 = q0a4,q0a5
+rigid_group_a3 = q0a6,q0a7
+rigid_group_a4 = q0a8,q0a9
+rigid_group_a5 = q0a10,q0a11
+rigid_group_a6 = q0a12,q0a13
+rigid_group_a7 = q0a14,q0a15
+rigid_group_a8 = q1a0,q1a1
+rigid_group_a9 = q1a2,q1a3
+rigid_group_a10 = q1a4,q1a5
+rigid_group_a11 = q1a6,q1a7
+rigid_group_a12 = q1a8,q1a9
+rigid_group_a13 = q1a10,q1a11
+rigid_group_a14 = q1a12,q1a13
+rigid_group_a15 = q1a14,q1a15
+rigid_group_a16 = q2a0,q2a1
+rigid_group_a17 = q2a2,q2a3
+rigid_group_a18 = q2a4,q2a5
+rigid_group_a19 = q2a6,q2a7
+rigid_group_a20 = q2a8,q2a9
+rigid_group_a21 = q2a10,q2a11
+rigid_group_a22 = q2a12,q2a13
+rigid_group_a23 = q2a14,q2a15
+rigid_group_a24 = q3a0,q3a1
+rigid_group_a25 = q3a2,q3a3
+rigid_group_a26 = q3a4,q3a5
+rigid_group_a27 = q3a6,q3a7
+rigid_group_a28 = q3a8,q3a9
+rigid_group_a29 = q3a10,q3a11
+rigid_group_a30 = q3a12,q3a13
+rigid_group_a31 = q3a14,q3a15
+
+rigid_group_collection_quadrants = q0,q1,q2,q3
+rigid_group_collection_asics = a0,a1,a2,a3,a4,a5,a6,a7,a8,a9,a10,a11,a12,a13,a14,a15,a16,a17,a18,a19,a20,a21,a22,a23,a24,a25,a26,a27,a28,a29,a30,a31
+
+q0a0/min_fs = 0
+q0a0/min_ss = 0
+q0a0/max_fs = 193
+q0a0/max_ss = 184
+q0a0/fs = -0.005902x +0.999983y
+q0a0/ss = -0.999983x -0.005902y
+q0a0/corner_x = 450.549
+q0a0/corner_y = -26.0936
+
+q0a1/min_fs = 194
+q0a1/min_ss = 0
+q0a1/max_fs = 387
+q0a1/max_ss = 184
+q0a1/fs = -0.005902x +0.999983y
+q0a1/ss = -0.999983x -0.005902y
+q0a1/corner_x = 449.387
+q0a1/corner_y = 170.903
+
+q0a2/min_fs = 0
+q0a2/min_ss = 185
+q0a2/max_fs = 193
+q0a2/max_ss = 369
+q0a2/fs = +0.000023x +1.000000y
+q0a2/ss = -1.000000x +0.000023y
+q0a2/corner_x = 236.256
+q0a2/corner_y = -27.7321
+
+q0a3/min_fs = 194
+q0a3/min_ss = 185
+q0a3/max_fs = 387
+q0a3/max_ss = 369
+q0a3/fs = +0.000023x +1.000000y
+q0a3/ss = -1.000000x +0.000023y
+q0a3/corner_x = 236.26
+q0a3/corner_y = 169.268
+
+q0a4/min_fs = 0
+q0a4/min_ss = 370
+q0a4/max_fs = 193
+q0a4/max_ss = 554
+q0a4/fs = -0.999985x +0.005489y
+q0a4/ss = -0.005489x -0.999985y
+q0a4/corner_x = 870.252
+q0a4/corner_y = 370.818
+
+q0a5/min_fs = 194
+q0a5/min_ss = 370
+q0a5/max_fs = 387
+q0a5/max_ss = 554
+q0a5/fs = -0.999985x +0.005489y
+q0a5/ss = -0.005489x -0.999985y
+q0a5/corner_x = 673.255
+q0a5/corner_y = 371.9
+
+q0a6/min_fs = 0
+q0a6/min_ss = 555
+q0a6/max_fs = 193
+q0a6/max_ss = 739
+q0a6/fs = -1.000000x -0.000609y
+q0a6/ss = +0.000609x -1.000000y
+q0a6/corner_x = 869.794
+q0a6/corner_y = 159.559
+
+q0a7/min_fs = 194
+q0a7/min_ss = 555
+q0a7/max_fs = 387
+q0a7/max_ss = 739
+q0a7/fs = -1.000000x -0.000609y
+q0a7/ss = +0.000609x -1.000000y
+q0a7/corner_x = 672.794
+q0a7/corner_y = 159.439
+
+q0a8/min_fs = 0
+q0a8/min_ss = 740
+q0a8/max_fs = 193
+q0a8/max_ss = 924
+q0a8/fs = -0.002572x -0.999997y
+q0a8/ss = +0.999997x -0.002572y
+q0a8/corner_x = 472.672
+q0a8/corner_y = 794.166
+
+q0a9/min_fs = 194
+q0a9/min_ss = 740
+q0a9/max_fs = 387
+q0a9/max_ss = 924
+q0a9/fs = -0.002572x -0.999997y
+q0a9/ss = +0.999997x -0.002572y
+q0a9/corner_x = 472.165
+q0a9/corner_y = 597.167
+
+q0a10/min_fs = 0
+q0a10/min_ss = 925
+q0a10/max_fs = 193
+q0a10/max_ss = 1109
+q0a10/fs = -0.001378x -0.999999y
+q0a10/ss = +0.999999x -0.001378y
+q0a10/corner_x = 684.789
+q0a10/corner_y = 794.027
+
+q0a11/min_fs = 194
+q0a11/min_ss = 925
+q0a11/max_fs = 387
+q0a11/max_ss = 1109
+q0a11/fs = -0.001378x -0.999999y
+q0a11/ss = +0.999999x -0.001378y
+q0a11/corner_x = 684.517
+q0a11/corner_y = 597.027
+
+q0a12/min_fs = 0
+q0a12/min_ss = 1110
+q0a12/max_fs = 193
+q0a12/max_ss = 1294
+q0a12/fs = -0.999993x -0.003801y
+q0a12/ss = +0.003801x -0.999993y
+q0a12/corner_x = 442.329
+q0a12/corner_y = 773.831
+
+q0a13/min_fs = 194
+q0a13/min_ss = 1110
+q0a13/max_fs = 387
+q0a13/max_ss = 1294
+q0a13/fs = -0.999993x -0.003801y
+q0a13/ss = +0.003801x -0.999993y
+q0a13/corner_x = 245.33
+q0a13/corner_y = 773.082
+
+q0a14/min_fs = 0
+q0a14/min_ss = 1295
+q0a14/max_fs = 193
+q0a14/max_ss = 1479
+q0a14/fs = -0.999998x -0.001814y
+q0a14/ss = +0.001814x -0.999998y
+q0a14/corner_x = 443.283
+q0a14/corner_y = 560.894
+
+q0a15/min_fs = 194
+q0a15/min_ss = 1295
+q0a15/max_fs = 387
+q0a15/max_ss = 1479
+q0a15/fs = -0.999998x -0.001814y
+q0a15/ss = +0.001814x -0.999998y
+q0a15/corner_x = 246.283
+q0a15/corner_y = 560.536
+
+q1a0/min_fs = 388
+q1a0/min_ss = 0
+q1a0/max_fs = 581
+q1a0/max_ss = 184
+q1a0/fs = -0.999983x -0.005902y
+q1a0/ss = +0.005902x -0.999983y
+q1a0/corner_x = 32.2636
+q1a0/corner_y = 447.419
+
+q1a1/min_fs = 582
+q1a1/min_ss = 0
+q1a1/max_fs = 775
+q1a1/max_ss = 184
+q1a1/fs = -0.999983x -0.005902y
+q1a1/ss = +0.005902x -0.999983y
+q1a1/corner_x = -164.733
+q1a1/corner_y = 446.257
+
+q1a2/min_fs = 388
+q1a2/min_ss = 185
+q1a2/max_fs = 581
+q1a2/max_ss = 369
+q1a2/fs = -1.000000x +0.000023y
+q1a2/ss = -0.000023x -1.000000y
+q1a2/corner_x = 33.9021
+q1a2/corner_y = 233.126
+
+q1a3/min_fs = 582
+q1a3/min_ss = 185
+q1a3/max_fs = 775
+q1a3/max_ss = 369
+q1a3/fs = -1.000000x +0.000023y
+q1a3/ss = -0.000023x -1.000000y
+q1a3/corner_x = -163.098
+q1a3/corner_y = 233.13
+
+q1a4/min_fs = 388
+q1a4/min_ss = 370
+q1a4/max_fs = 581
+q1a4/max_ss = 554
+q1a4/fs = -0.005489x -0.999985y
+q1a4/ss = +0.999985x -0.005489y
+q1a4/corner_x = -364.648
+q1a4/corner_y = 867.122
+
+q1a5/min_fs = 582
+q1a5/min_ss = 370
+q1a5/max_fs = 775
+q1a5/max_ss = 554
+q1a5/fs = -0.005489x -0.999985y
+q1a5/ss = +0.999985x -0.005489y
+q1a5/corner_x = -365.73
+q1a5/corner_y = 670.125
+
+q1a6/min_fs = 388
+q1a6/min_ss = 555
+q1a6/max_fs = 581
+q1a6/max_ss = 739
+q1a6/fs = +0.000609x -1.000000y
+q1a6/ss = +1.000000x +0.000609y
+q1a6/corner_x = -153.389
+q1a6/corner_y = 866.664
+
+q1a7/min_fs = 582
+q1a7/min_ss = 555
+q1a7/max_fs = 775
+q1a7/max_ss = 739
+q1a7/fs = +0.000609x -1.000000y
+q1a7/ss = +1.000000x +0.000609y
+q1a7/corner_x = -153.269
+q1a7/corner_y = 669.664
+
+q1a8/min_fs = 388
+q1a8/min_ss = 740
+q1a8/max_fs = 581
+q1a8/max_ss = 924
+q1a8/fs = +0.999997x -0.002572y
+q1a8/ss = +0.002572x +0.999997y
+q1a8/corner_x = -787.996
+q1a8/corner_y = 469.542
+
+q1a9/min_fs = 582
+q1a9/min_ss = 740
+q1a9/max_fs = 775
+q1a9/max_ss = 924
+q1a9/fs = +0.999997x -0.002572y
+q1a9/ss = +0.002572x +0.999997y
+q1a9/corner_x = -590.997
+q1a9/corner_y = 469.035
+
+q1a10/min_fs = 388
+q1a10/min_ss = 925
+q1a10/max_fs = 581
+q1a10/max_ss = 1109
+q1a10/fs = +0.999999x -0.001378y
+q1a10/ss = +0.001378x +0.999999y
+q1a10/corner_x = -787.857
+q1a10/corner_y = 681.659
+
+q1a11/min_fs = 582
+q1a11/min_ss = 925
+q1a11/max_fs = 775
+q1a11/max_ss = 1109
+q1a11/fs = +0.999999x -0.001378y
+q1a11/ss = +0.001378x +0.999999y
+q1a11/corner_x = -590.857
+q1a11/corner_y = 681.387
+
+q1a12/min_fs = 388
+q1a12/min_ss = 1110
+q1a12/max_fs = 581
+q1a12/max_ss = 1294
+q1a12/fs = +0.003801x -0.999993y
+q1a12/ss = +0.999993x +0.003801y
+q1a12/corner_x = -767.661
+q1a12/corner_y = 439.199
+
+q1a13/min_fs = 582
+q1a13/min_ss = 1110
+q1a13/max_fs = 775
+q1a13/max_ss = 1294
+q1a13/fs = +0.003801x -0.999993y
+q1a13/ss = +0.999993x +0.003801y
+q1a13/corner_x = -766.912
+q1a13/corner_y = 242.2
+
+q1a14/min_fs = 388
+q1a14/min_ss = 1295
+q1a14/max_fs = 581
+q1a14/max_ss = 1479
+q1a14/fs = +0.001814x -0.999998y
+q1a14/ss = +0.999998x +0.001814y
+q1a14/corner_x = -554.724
+q1a14/corner_y = 440.153
+
+q1a15/min_fs = 582
+q1a15/min_ss = 1295
+q1a15/max_fs = 775
+q1a15/max_ss = 1479
+q1a15/fs = +0.001814x -0.999998y
+q1a15/ss = +0.999998x +0.001814y
+q1a15/corner_x = -554.366
+q1a15/corner_y = 243.153
+
+q2a0/min_fs = 776
+q2a0/min_ss = 0
+q2a0/max_fs = 969
+q2a0/max_ss = 184
+q2a0/fs = +0.005902x -0.999983y
+q2a0/ss = +0.999983x +0.005902y
+q2a0/corner_x = -440.449
+q2a0/corner_y = 29.3336
+
+q2a1/min_fs = 970
+q2a1/min_ss = 0
+q2a1/max_fs = 1163
+q2a1/max_ss = 184
+q2a1/fs = +0.005902x -0.999983y
+q2a1/ss = +0.999983x +0.005902y
+q2a1/corner_x = -439.287
+q2a1/corner_y = -167.663
+
+q2a2/min_fs = 776
+q2a2/min_ss = 185
+q2a2/max_fs = 969
+q2a2/max_ss = 369
+q2a2/fs = -0.000023x -1.000000y
+q2a2/ss = +1.000000x -0.000023y
+q2a2/corner_x = -226.156
+q2a2/corner_y = 30.9721
+
+q2a3/min_fs = 970
+q2a3/min_ss = 185
+q2a3/max_fs = 1163
+q2a3/max_ss = 369
+q2a3/fs = -0.000023x -1.000000y
+q2a3/ss = +1.000000x -0.000023y
+q2a3/corner_x = -226.16
+q2a3/corner_y = -166.028
+
+q2a4/min_fs = 776
+q2a4/min_ss = 370
+q2a4/max_fs = 969
+q2a4/max_ss = 554
+q2a4/fs = +0.999985x -0.005489y
+q2a4/ss = +0.005489x +0.999985y
+q2a4/corner_x = -860.152
+q2a4/corner_y = -367.578
+
+q2a5/min_fs = 970
+q2a5/min_ss = 370
+q2a5/max_fs = 1163
+q2a5/max_ss = 554
+q2a5/fs = +0.999985x -0.005489y
+q2a5/ss = +0.005489x +0.999985y
+q2a5/corner_x = -663.155
+q2a5/corner_y = -368.66
+
+q2a6/min_fs = 776
+q2a6/min_ss = 555
+q2a6/max_fs = 969
+q2a6/max_ss = 739
+q2a6/fs = +1.000000x +0.000609y
+q2a6/ss = -0.000609x +1.000000y
+q2a6/corner_x = -859.694
+q2a6/corner_y = -156.319
+
+q2a7/min_fs = 970
+q2a7/min_ss = 555
+q2a7/max_fs = 1163
+q2a7/max_ss = 739
+q2a7/fs = +1.000000x +0.000609y
+q2a7/ss = -0.000609x +1.000000y
+q2a7/corner_x = -662.694
+q2a7/corner_y = -156.199
+
+q2a8/min_fs = 776
+q2a8/min_ss = 740
+q2a8/max_fs = 969
+q2a8/max_ss = 924
+q2a8/fs = +0.002572x +0.999997y
+q2a8/ss = -0.999997x +0.002572y
+q2a8/corner_x = -462.572
+q2a8/corner_y = -790.926
+
+q2a9/min_fs = 970
+q2a9/min_ss = 740
+q2a9/max_fs = 1163
+q2a9/max_ss = 924
+q2a9/fs = +0.002572x +0.999997y
+q2a9/ss = -0.999997x +0.002572y
+q2a9/corner_x = -462.065
+q2a9/corner_y = -593.927
+
+q2a10/min_fs = 776
+q2a10/min_ss = 925
+q2a10/max_fs = 969
+q2a10/max_ss = 1109
+q2a10/fs = +0.001378x +0.999999y
+q2a10/ss = -0.999999x +0.001378y
+q2a10/corner_x = -674.689
+q2a10/corner_y = -790.787
+
+q2a11/min_fs = 970
+q2a11/min_ss = 925
+q2a11/max_fs = 1163
+q2a11/max_ss = 1109
+q2a11/fs = +0.001378x +0.999999y
+q2a11/ss = -0.999999x +0.001378y
+q2a11/corner_x = -674.417
+q2a11/corner_y = -593.787
+
+q2a12/min_fs = 776
+q2a12/min_ss = 1110
+q2a12/max_fs = 969
+q2a12/max_ss = 1294
+q2a12/fs = +0.999993x +0.003801y
+q2a12/ss = -0.003801x +0.999993y
+q2a12/corner_x = -432.229
+q2a12/corner_y = -770.591
+
+q2a13/min_fs = 970
+q2a13/min_ss = 1110
+q2a13/max_fs = 1163
+q2a13/max_ss = 1294
+q2a13/fs = +0.999993x +0.003801y
+q2a13/ss = -0.003801x +0.999993y
+q2a13/corner_x = -235.23
+q2a13/corner_y = -769.842
+
+q2a14/min_fs = 776
+q2a14/min_ss = 1295
+q2a14/max_fs = 969
+q2a14/max_ss = 1479
+q2a14/fs = +0.999998x +0.001814y
+q2a14/ss = -0.001814x +0.999998y
+q2a14/corner_x = -433.183
+q2a14/corner_y = -557.654
+
+q2a15/min_fs = 970
+q2a15/min_ss = 1295
+q2a15/max_fs = 1163
+q2a15/max_ss = 1479
+q2a15/fs = +0.999998x +0.001814y
+q2a15/ss = -0.001814x +0.999998y
+q2a15/corner_x = -236.183
+q2a15/corner_y = -557.296
+
+q3a0/min_fs = 1164
+q3a0/min_ss = 0
+q3a0/max_fs = 1357
+q3a0/max_ss = 184
+q3a0/fs = +0.999983x +0.005902y
+q3a0/ss = -0.005902x +0.999983y
+q3a0/corner_x = -26.8636
+q3a0/corner_y = -442.879
+
+q3a1/min_fs = 1358
+q3a1/min_ss = 0
+q3a1/max_fs = 1551
+q3a1/max_ss = 184
+q3a1/fs = +0.999983x +0.005902y
+q3a1/ss = -0.005902x +0.999983y
+q3a1/corner_x = 170.133
+q3a1/corner_y = -441.717
+
+q3a2/min_fs = 1164
+q3a2/min_ss = 185
+q3a2/max_fs = 1357
+q3a2/max_ss = 369
+q3a2/fs = +1.000000x -0.000023y
+q3a2/ss = +0.000023x +1.000000y
+q3a2/corner_x = -28.5021
+q3a2/corner_y = -228.586
+
+q3a3/min_fs = 1358
+q3a3/min_ss = 185
+q3a3/max_fs = 1551
+q3a3/max_ss = 369
+q3a3/fs = +1.000000x -0.000023y
+q3a3/ss = +0.000023x +1.000000y
+q3a3/corner_x = 168.498
+q3a3/corner_y = -228.59
+
+q3a4/min_fs = 1164
+q3a4/min_ss = 370
+q3a4/max_fs = 1357
+q3a4/max_ss = 554
+q3a4/fs = +0.005489x +0.999985y
+q3a4/ss = -0.999985x +0.005489y
+q3a4/corner_x = 370.048
+q3a4/corner_y = -862.582
+
+q3a5/min_fs = 1358
+q3a5/min_ss = 370
+q3a5/max_fs = 1551
+q3a5/max_ss = 554
+q3a5/fs = +0.005489x +0.999985y
+q3a5/ss = -0.999985x +0.005489y
+q3a5/corner_x = 371.13
+q3a5/corner_y = -665.585
+
+q3a6/min_fs = 1164
+q3a6/min_ss = 555
+q3a6/max_fs = 1357
+q3a6/max_ss = 739
+q3a6/fs = -0.000609x +1.000000y
+q3a6/ss = -1.000000x -0.000609y
+q3a6/corner_x = 158.789
+q3a6/corner_y = -862.124
+
+q3a7/min_fs = 1358
+q3a7/min_ss = 555
+q3a7/max_fs = 1551
+q3a7/max_ss = 739
+q3a7/fs = -0.000609x +1.000000y
+q3a7/ss = -1.000000x -0.000609y
+q3a7/corner_x = 158.669
+q3a7/corner_y = -665.124
+
+q3a8/min_fs = 1164
+q3a8/min_ss = 740
+q3a8/max_fs = 1357
+q3a8/max_ss = 924
+q3a8/fs = -0.999997x +0.002572y
+q3a8/ss = -0.002572x -0.999997y
+q3a8/corner_x = 793.396
+q3a8/corner_y = -465.002
+
+q3a9/min_fs = 1358
+q3a9/min_ss = 740
+q3a9/max_fs = 1551
+q3a9/max_ss = 924
+q3a9/fs = -0.999997x +0.002572y
+q3a9/ss = -0.002572x -0.999997y
+q3a9/corner_x = 596.397
+q3a9/corner_y = -464.495
+
+q3a10/min_fs = 1164
+q3a10/min_ss = 925
+q3a10/max_fs = 1357
+q3a10/max_ss = 1109
+q3a10/fs = -0.999999x +0.001378y
+q3a10/ss = -0.001378x -0.999999y
+q3a10/corner_x = 793.257
+q3a10/corner_y = -677.119
+
+q3a11/min_fs = 1358
+q3a11/min_ss = 925
+q3a11/max_fs = 1551
+q3a11/max_ss = 1109
+q3a11/fs = -0.999999x +0.001378y
+q3a11/ss = -0.001378x -0.999999y
+q3a11/corner_x = 596.257
+q3a11/corner_y = -676.847
+
+q3a12/min_fs = 1164
+q3a12/min_ss = 1110
+q3a12/max_fs = 1357
+q3a12/max_ss = 1294
+q3a12/fs = -0.003801x +0.999993y
+q3a12/ss = -0.999993x -0.003801y
+q3a12/corner_x = 773.061
+q3a12/corner_y = -434.659
+
+q3a13/min_fs = 1358
+q3a13/min_ss = 1110
+q3a13/max_fs = 1551
+q3a13/max_ss = 1294
+q3a13/fs = -0.003801x +0.999993y
+q3a13/ss = -0.999993x -0.003801y
+q3a13/corner_x = 772.312
+q3a13/corner_y = -237.66
+
+q3a14/min_fs = 1164
+q3a14/min_ss = 1295
+q3a14/max_fs = 1357
+q3a14/max_ss = 1479
+q3a14/fs = -0.001814x +0.999998y
+q3a14/ss = -0.999998x -0.001814y
+q3a14/corner_x = 560.124
+q3a14/corner_y = -435.613
+
+q3a15/min_fs = 1358
+q3a15/min_ss = 1295
+q3a15/max_fs = 1551
+q3a15/max_ss = 1479
+q3a15/fs = -0.001814x +0.999998y
+q3a15/ss = -0.999998x -0.001814y
+q3a15/corner_x = 559.766
+q3a15/corner_y = -238.613
diff --git a/files/check-peak-detection b/files/check-peak-detection
new file mode 100755
index 0000000..91d21f6
--- /dev/null
+++ b/files/check-peak-detection
@@ -0,0 +1,153 @@
+#!/usr/bin/perl -w
+
+use strict;
+use File::Basename;
+use File::stat;
+
+my $skip = 0;
+
+my $only;
+my $file;
+my $start;
+
+# Horrible option processing
+if ( $ARGV[0] eq "--indexed" ) {
+ $only = "indexed";
+ $file = $ARGV[1];
+ $start = 2;
+} elsif ( $ARGV[0] eq "--not-indexed" ) {
+ $only = "notindexed";
+ $file = $ARGV[1];
+ $start = 2;
+} else {
+ $only = "";
+ $file = $ARGV[0];
+ $start = 1;
+}
+my $args = join(" ", splice(@ARGV, $start, scalar(@ARGV)-1));
+if ( !($args eq "") ) {
+ printf("Extra arguments for hdfsee: %s\n", $args);
+} else {
+ # Default arguments - feel free to override!
+ $args = "--binning=2 --int-boost=10";
+ printf("Using default arguments for hdfsee: %s\n", $args);
+}
+
+open(FH, $file);
+open(TMP, "> list.tmp");
+
+my $statbuf = stat($file);
+if ( not $statbuf ) {
+ printf("Couldn't stat stream. Check the filename.\n");
+ exit;
+}
+my $stream_mtime = $statbuf->mtime;
+
+my $in_image = 0;
+my $line;
+my $filename;
+my $event = "";
+my $indexed;
+my $n_seen = 0;
+
+while ( $line = <FH> ) {
+
+ chomp $line;
+
+ if ( $in_image ) {
+ printf(TMP "%s\n", $line);
+ }
+
+ if ( $line =~ /^Peaks\ from\ peak\ search$/ ) {
+ $in_image = 1;
+ }
+
+ if ( $line =~ /^Image\ filename:\ (.+)$/ ) {
+ $filename = $1;
+ }
+
+ if ( $line =~ /^Event:\ (.+)$/ ) {
+ $event = $1;
+ }
+
+ if ( $line =~ /^indexed_by\ =\ (.*)$/ ) {
+ if ( $1 eq "none" ) {
+ $indexed = 0;
+ } else {
+ $indexed = 1;
+ }
+ }
+
+ if ( $line =~ /^End\ of\ peak\ list$/ ) {
+
+ close(TMP);
+
+ my $show;
+
+ if ( $only eq "indexed" ) {
+ if ( $indexed ) {
+ $show = 1;
+ } else {
+ $show = 0;
+ }
+ } elsif ( $only eq "notindexed" ) {
+ if ( $indexed ) {
+ $show = 0;
+ } else {
+ $show = 1;
+ }
+ } else {
+ $show = 1;
+ }
+
+ if ( !$show ) {
+ printf(STDERR "Not showing %s\n", $filename);
+ unlink("list.tmp");
+ open(TMP, "> list.tmp");
+ $in_image = 0;
+ next;
+ }
+
+ # Example of how to do "basename" and "prefix":
+ # $filename = "images-old/".basename($filename);
+
+ my $ev;
+ my $evr;
+ if ( $event eq "" ) {
+ $ev = "";
+ $evr = "";
+ } else {
+ $ev = " --event=".$event;
+ $evr = ", event ".$event;
+ }
+
+ $n_seen++;
+ if ( $n_seen > $skip ) {
+
+ my $statbuf = stat($filename);
+ if ( not $statbuf ) {
+ printf("Couldn't stat image file '%s' - does it exist?\n",
+ $filename);
+ exit;
+ }
+ my $image_mtime = $statbuf->mtime;
+ if ( $image_mtime > $stream_mtime ) {
+ printf(STDERR "WARNING: Image file is newer than stream\n");
+ }
+
+ printf(STDERR "Viewing %s%s\n", $filename, $evr);
+ system("hdfsee ".$filename.$ev.
+ " --peak-overlay=list.tmp ".$args);
+ if ( $? != 0 ) { exit; }
+ } else {
+ printf(STDERR "Skipping %s%s\n", $filename, $evr);
+ }
+
+ unlink("list.tmp");
+ open(TMP, "> list.tmp");
+ $in_image = 0;
+ $event = "";
+
+ }
+
+}
diff --git a/files/files.lst b/files/files.lst
new file mode 100644
index 0000000..ac5e1c8
--- /dev/null
+++ b/files/files.lst
@@ -0,0 +1,5775 @@
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diff --git a/files/nocell.stream b/files/nocell.stream
new file mode 100644
index 0000000..f0b64ff
--- /dev/null
+++ b/files/nocell.stream
@@ -0,0 +1,1324 @@
+CrystFEL stream format 2.3
+Generated by CrystFEL 0.8.0+6e0da0f1
+/home/taw/crystfel/build/indexamajig -i files-10.lst -o test.stream -g 5HT2b-Liu-2013-predrefine.geom --peaks=peakfinder8 --threshold=800 --min-pix-count=1 --min-snr=3 -j 3 -p 5HT2B.cell
+Indexing methods selected: mosflm-cell-nolatt,mosflm-latt-nocell,dirax,asdf,xgandalf
+----- Begin geometry file -----
+adu_per_eV = 0.00105
+clen = /LCLS/detector0-EncoderValue
+coffset = 582.00e-3
+photon_energy = /LCLS/photon_energy_eV
+;photon_energy = 9000
+res = 9097.525473
+
+bad_thing/min_x = -390
+bad_thing/max_x = -270
+bad_thing/min_y = 820
+bad_thing/max_y = 890
+
+bad_sparkly/min_x = -220
+bad_sparkly/max_x = -180
+bad_sparkly/min_y = 30
+bad_sparkly/max_y = 235
+
+bad_squiggle/min_x = 80
+bad_squiggle/max_x = 180
+bad_squiggle/min_y = 595
+bad_squiggle/max_y = 640
+
+; The following lines define "rigid groups" which express the physical
+; construction of the detector. This is used when refining the detector
+; geometry.
+
+rigid_group_q0 = q0a0,q0a1,q0a2,q0a3,q0a4,q0a5,q0a6,q0a7,q0a8,q0a9,q0a10,q0a11,q0a12,q0a13,q0a14,q0a15
+rigid_group_q1 = q1a0,q1a1,q1a2,q1a3,q1a4,q1a5,q1a6,q1a7,q1a8,q1a9,q1a10,q1a11,q1a12,q1a13,q1a14,q1a15
+rigid_group_q2 = q2a0,q2a1,q2a2,q2a3,q2a4,q2a5,q2a6,q2a7,q2a8,q2a9,q2a10,q2a11,q2a12,q2a13,q2a14,q2a15
+rigid_group_q3 = q3a0,q3a1,q3a2,q3a3,q3a4,q3a5,q3a6,q3a7,q3a8,q3a9,q3a10,q3a11,q3a12,q3a13,q3a14,q3a15
+
+rigid_group_a0 = q0a0,q0a1
+rigid_group_a1 = q0a2,q0a3
+rigid_group_a2 = q0a4,q0a5
+rigid_group_a3 = q0a6,q0a7
+rigid_group_a4 = q0a8,q0a9
+rigid_group_a5 = q0a10,q0a11
+rigid_group_a6 = q0a12,q0a13
+rigid_group_a7 = q0a14,q0a15
+rigid_group_a8 = q1a0,q1a1
+rigid_group_a9 = q1a2,q1a3
+rigid_group_a10 = q1a4,q1a5
+rigid_group_a11 = q1a6,q1a7
+rigid_group_a12 = q1a8,q1a9
+rigid_group_a13 = q1a10,q1a11
+rigid_group_a14 = q1a12,q1a13
+rigid_group_a15 = q1a14,q1a15
+rigid_group_a16 = q2a0,q2a1
+rigid_group_a17 = q2a2,q2a3
+rigid_group_a18 = q2a4,q2a5
+rigid_group_a19 = q2a6,q2a7
+rigid_group_a20 = q2a8,q2a9
+rigid_group_a21 = q2a10,q2a11
+rigid_group_a22 = q2a12,q2a13
+rigid_group_a23 = q2a14,q2a15
+rigid_group_a24 = q3a0,q3a1
+rigid_group_a25 = q3a2,q3a3
+rigid_group_a26 = q3a4,q3a5
+rigid_group_a27 = q3a6,q3a7
+rigid_group_a28 = q3a8,q3a9
+rigid_group_a29 = q3a10,q3a11
+rigid_group_a30 = q3a12,q3a13
+rigid_group_a31 = q3a14,q3a15
+
+rigid_group_collection_quadrants = q0,q1,q2,q3
+rigid_group_collection_asics = a0,a1,a2,a3,a4,a5,a6,a7,a8,a9,a10,a11,a12,a13,a14,a15,a16,a17,a18,a19,a20,a21,a22,a23,a24,a25,a26,a27,a28,a29,a30,a31
+
+q0a0/min_fs = 0
+q0a0/min_ss = 0
+q0a0/max_fs = 193
+q0a0/max_ss = 184
+q0a0/fs = -0.005902x +0.999983y
+q0a0/ss = -0.999983x -0.005902y
+q0a0/corner_x = 449.314461
+q0a0/corner_y = -28.273254
+
+q0a1/min_fs = 194
+q0a1/min_ss = 0
+q0a1/max_fs = 387
+q0a1/max_ss = 184
+q0a1/fs = -0.005902x +0.999983y
+q0a1/ss = -0.999983x -0.005902y
+q0a1/corner_x = 448.152461
+q0a1/corner_y = 168.723346
+
+q0a2/min_fs = 0
+q0a2/min_ss = 185
+q0a2/max_fs = 193
+q0a2/max_ss = 369
+q0a2/fs = +0.000023x +1.000000y
+q0a2/ss = -1.000000x +0.000023y
+q0a2/corner_x = 235.021461
+q0a2/corner_y = -29.911754
+
+q0a3/min_fs = 194
+q0a3/min_ss = 185
+q0a3/max_fs = 387
+q0a3/max_ss = 369
+q0a3/fs = +0.000023x +1.000000y
+q0a3/ss = -1.000000x +0.000023y
+q0a3/corner_x = 235.025461
+q0a3/corner_y = 167.088346
+
+q0a4/min_fs = 0
+q0a4/min_ss = 370
+q0a4/max_fs = 193
+q0a4/max_ss = 554
+q0a4/fs = -0.999985x +0.005489y
+q0a4/ss = -0.005489x -0.999985y
+q0a4/corner_x = 869.017461
+q0a4/corner_y = 368.638346
+
+q0a5/min_fs = 194
+q0a5/min_ss = 370
+q0a5/max_fs = 387
+q0a5/max_ss = 554
+q0a5/fs = -0.999985x +0.005489y
+q0a5/ss = -0.005489x -0.999985y
+q0a5/corner_x = 672.020461
+q0a5/corner_y = 369.720346
+
+q0a6/min_fs = 0
+q0a6/min_ss = 555
+q0a6/max_fs = 193
+q0a6/max_ss = 739
+q0a6/fs = -1.000000x -0.000609y
+q0a6/ss = +0.000609x -1.000000y
+q0a6/corner_x = 868.559461
+q0a6/corner_y = 157.379346
+
+q0a7/min_fs = 194
+q0a7/min_ss = 555
+q0a7/max_fs = 387
+q0a7/max_ss = 739
+q0a7/fs = -1.000000x -0.000609y
+q0a7/ss = +0.000609x -1.000000y
+q0a7/corner_x = 671.559461
+q0a7/corner_y = 157.259346
+
+q0a8/min_fs = 0
+q0a8/min_ss = 740
+q0a8/max_fs = 193
+q0a8/max_ss = 924
+q0a8/fs = -0.002572x -0.999997y
+q0a8/ss = +0.999997x -0.002572y
+q0a8/corner_x = 471.437461
+q0a8/corner_y = 791.986346
+
+q0a9/min_fs = 194
+q0a9/min_ss = 740
+q0a9/max_fs = 387
+q0a9/max_ss = 924
+q0a9/fs = -0.002572x -0.999997y
+q0a9/ss = +0.999997x -0.002572y
+q0a9/corner_x = 470.930461
+q0a9/corner_y = 594.987346
+
+q0a10/min_fs = 0
+q0a10/min_ss = 925
+q0a10/max_fs = 193
+q0a10/max_ss = 1109
+q0a10/fs = -0.001378x -0.999999y
+q0a10/ss = +0.999999x -0.001378y
+q0a10/corner_x = 683.554461
+q0a10/corner_y = 791.847346
+
+q0a11/min_fs = 194
+q0a11/min_ss = 925
+q0a11/max_fs = 387
+q0a11/max_ss = 1109
+q0a11/fs = -0.001378x -0.999999y
+q0a11/ss = +0.999999x -0.001378y
+q0a11/corner_x = 683.282461
+q0a11/corner_y = 594.847346
+
+q0a12/min_fs = 0
+q0a12/min_ss = 1110
+q0a12/max_fs = 193
+q0a12/max_ss = 1294
+q0a12/fs = -0.999993x -0.003801y
+q0a12/ss = +0.003801x -0.999993y
+q0a12/corner_x = 441.094461
+q0a12/corner_y = 771.651346
+
+q0a13/min_fs = 194
+q0a13/min_ss = 1110
+q0a13/max_fs = 387
+q0a13/max_ss = 1294
+q0a13/fs = -0.999993x -0.003801y
+q0a13/ss = +0.003801x -0.999993y
+q0a13/corner_x = 244.095461
+q0a13/corner_y = 770.902346
+
+q0a14/min_fs = 0
+q0a14/min_ss = 1295
+q0a14/max_fs = 193
+q0a14/max_ss = 1479
+q0a14/fs = -0.999998x -0.001814y
+q0a14/ss = +0.001814x -0.999998y
+q0a14/corner_x = 442.048461
+q0a14/corner_y = 558.714346
+
+q0a15/min_fs = 194
+q0a15/min_ss = 1295
+q0a15/max_fs = 387
+q0a15/max_ss = 1479
+q0a15/fs = -0.999998x -0.001814y
+q0a15/ss = +0.001814x -0.999998y
+q0a15/corner_x = 245.048461
+q0a15/corner_y = 558.356346
+
+q1a0/min_fs = 388
+q1a0/min_ss = 0
+q1a0/max_fs = 581
+q1a0/max_ss = 184
+q1a0/fs = -0.999983x -0.005902y
+q1a0/ss = +0.005902x -0.999983y
+q1a0/corner_x = 31.029061
+q1a0/corner_y = 445.239346
+
+q1a1/min_fs = 582
+q1a1/min_ss = 0
+q1a1/max_fs = 775
+q1a1/max_ss = 184
+q1a1/fs = -0.999983x -0.005902y
+q1a1/ss = +0.005902x -0.999983y
+q1a1/corner_x = -165.967539
+q1a1/corner_y = 444.077346
+
+q1a2/min_fs = 388
+q1a2/min_ss = 185
+q1a2/max_fs = 581
+q1a2/max_ss = 369
+q1a2/fs = -1.000000x +0.000023y
+q1a2/ss = -0.000023x -1.000000y
+q1a2/corner_x = 32.667561
+q1a2/corner_y = 230.946346
+
+q1a3/min_fs = 582
+q1a3/min_ss = 185
+q1a3/max_fs = 775
+q1a3/max_ss = 369
+q1a3/fs = -1.000000x +0.000023y
+q1a3/ss = -0.000023x -1.000000y
+q1a3/corner_x = -164.332539
+q1a3/corner_y = 230.950346
+
+q1a4/min_fs = 388
+q1a4/min_ss = 370
+q1a4/max_fs = 581
+q1a4/max_ss = 554
+q1a4/fs = -0.005489x -0.999985y
+q1a4/ss = +0.999985x -0.005489y
+q1a4/corner_x = -365.882539
+q1a4/corner_y = 864.942346
+
+q1a5/min_fs = 582
+q1a5/min_ss = 370
+q1a5/max_fs = 775
+q1a5/max_ss = 554
+q1a5/fs = -0.005489x -0.999985y
+q1a5/ss = +0.999985x -0.005489y
+q1a5/corner_x = -366.964539
+q1a5/corner_y = 667.945346
+
+q1a6/min_fs = 388
+q1a6/min_ss = 555
+q1a6/max_fs = 581
+q1a6/max_ss = 739
+q1a6/fs = +0.000609x -1.000000y
+q1a6/ss = +1.000000x +0.000609y
+q1a6/corner_x = -154.623539
+q1a6/corner_y = 864.484346
+
+q1a7/min_fs = 582
+q1a7/min_ss = 555
+q1a7/max_fs = 775
+q1a7/max_ss = 739
+q1a7/fs = +0.000609x -1.000000y
+q1a7/ss = +1.000000x +0.000609y
+q1a7/corner_x = -154.503539
+q1a7/corner_y = 667.484346
+
+q1a8/min_fs = 388
+q1a8/min_ss = 740
+q1a8/max_fs = 581
+q1a8/max_ss = 924
+q1a8/fs = +0.999997x -0.002572y
+q1a8/ss = +0.002572x +0.999997y
+q1a8/corner_x = -789.230539
+q1a8/corner_y = 467.362346
+
+q1a9/min_fs = 582
+q1a9/min_ss = 740
+q1a9/max_fs = 775
+q1a9/max_ss = 924
+q1a9/fs = +0.999997x -0.002572y
+q1a9/ss = +0.002572x +0.999997y
+q1a9/corner_x = -592.231539
+q1a9/corner_y = 466.855346
+
+q1a10/min_fs = 388
+q1a10/min_ss = 925
+q1a10/max_fs = 581
+q1a10/max_ss = 1109
+q1a10/fs = +0.999999x -0.001378y
+q1a10/ss = +0.001378x +0.999999y
+q1a10/corner_x = -789.091539
+q1a10/corner_y = 679.479346
+
+q1a11/min_fs = 582
+q1a11/min_ss = 925
+q1a11/max_fs = 775
+q1a11/max_ss = 1109
+q1a11/fs = +0.999999x -0.001378y
+q1a11/ss = +0.001378x +0.999999y
+q1a11/corner_x = -592.091539
+q1a11/corner_y = 679.207346
+
+q1a12/min_fs = 388
+q1a12/min_ss = 1110
+q1a12/max_fs = 581
+q1a12/max_ss = 1294
+q1a12/fs = +0.003801x -0.999993y
+q1a12/ss = +0.999993x +0.003801y
+q1a12/corner_x = -768.895539
+q1a12/corner_y = 437.019346
+
+q1a13/min_fs = 582
+q1a13/min_ss = 1110
+q1a13/max_fs = 775
+q1a13/max_ss = 1294
+q1a13/fs = +0.003801x -0.999993y
+q1a13/ss = +0.999993x +0.003801y
+q1a13/corner_x = -768.146539
+q1a13/corner_y = 240.020346
+
+q1a14/min_fs = 388
+q1a14/min_ss = 1295
+q1a14/max_fs = 581
+q1a14/max_ss = 1479
+q1a14/fs = +0.001814x -0.999998y
+q1a14/ss = +0.999998x +0.001814y
+q1a14/corner_x = -555.958539
+q1a14/corner_y = 437.973346
+
+q1a15/min_fs = 582
+q1a15/min_ss = 1295
+q1a15/max_fs = 775
+q1a15/max_ss = 1479
+q1a15/fs = +0.001814x -0.999998y
+q1a15/ss = +0.999998x +0.001814y
+q1a15/corner_x = -555.600539
+q1a15/corner_y = 240.973346
+
+q2a0/min_fs = 776
+q2a0/min_ss = 0
+q2a0/max_fs = 969
+q2a0/max_ss = 184
+q2a0/fs = +0.005902x -0.999983y
+q2a0/ss = +0.999983x +0.005902y
+q2a0/corner_x = -441.683539
+q2a0/corner_y = 27.153946
+
+q2a1/min_fs = 970
+q2a1/min_ss = 0
+q2a1/max_fs = 1163
+q2a1/max_ss = 184
+q2a1/fs = +0.005902x -0.999983y
+q2a1/ss = +0.999983x +0.005902y
+q2a1/corner_x = -440.521539
+q2a1/corner_y = -169.842654
+
+q2a2/min_fs = 776
+q2a2/min_ss = 185
+q2a2/max_fs = 969
+q2a2/max_ss = 369
+q2a2/fs = -0.000023x -1.000000y
+q2a2/ss = +1.000000x -0.000023y
+q2a2/corner_x = -227.390539
+q2a2/corner_y = 28.792446
+
+q2a3/min_fs = 970
+q2a3/min_ss = 185
+q2a3/max_fs = 1163
+q2a3/max_ss = 369
+q2a3/fs = -0.000023x -1.000000y
+q2a3/ss = +1.000000x -0.000023y
+q2a3/corner_x = -227.394539
+q2a3/corner_y = -168.207654
+
+q2a4/min_fs = 776
+q2a4/min_ss = 370
+q2a4/max_fs = 969
+q2a4/max_ss = 554
+q2a4/fs = +0.999985x -0.005489y
+q2a4/ss = +0.005489x +0.999985y
+q2a4/corner_x = -861.386539
+q2a4/corner_y = -369.757654
+
+q2a5/min_fs = 970
+q2a5/min_ss = 370
+q2a5/max_fs = 1163
+q2a5/max_ss = 554
+q2a5/fs = +0.999985x -0.005489y
+q2a5/ss = +0.005489x +0.999985y
+q2a5/corner_x = -664.389539
+q2a5/corner_y = -370.839654
+
+q2a6/min_fs = 776
+q2a6/min_ss = 555
+q2a6/max_fs = 969
+q2a6/max_ss = 739
+q2a6/fs = +1.000000x +0.000609y
+q2a6/ss = -0.000609x +1.000000y
+q2a6/corner_x = -860.928539
+q2a6/corner_y = -158.498654
+
+q2a7/min_fs = 970
+q2a7/min_ss = 555
+q2a7/max_fs = 1163
+q2a7/max_ss = 739
+q2a7/fs = +1.000000x +0.000609y
+q2a7/ss = -0.000609x +1.000000y
+q2a7/corner_x = -663.928539
+q2a7/corner_y = -158.378654
+
+q2a8/min_fs = 776
+q2a8/min_ss = 740
+q2a8/max_fs = 969
+q2a8/max_ss = 924
+q2a8/fs = +0.002572x +0.999997y
+q2a8/ss = -0.999997x +0.002572y
+q2a8/corner_x = -463.806539
+q2a8/corner_y = -793.105654
+
+q2a9/min_fs = 970
+q2a9/min_ss = 740
+q2a9/max_fs = 1163
+q2a9/max_ss = 924
+q2a9/fs = +0.002572x +0.999997y
+q2a9/ss = -0.999997x +0.002572y
+q2a9/corner_x = -463.299539
+q2a9/corner_y = -596.106654
+
+q2a10/min_fs = 776
+q2a10/min_ss = 925
+q2a10/max_fs = 969
+q2a10/max_ss = 1109
+q2a10/fs = +0.001378x +0.999999y
+q2a10/ss = -0.999999x +0.001378y
+q2a10/corner_x = -675.923539
+q2a10/corner_y = -792.966654
+
+q2a11/min_fs = 970
+q2a11/min_ss = 925
+q2a11/max_fs = 1163
+q2a11/max_ss = 1109
+q2a11/fs = +0.001378x +0.999999y
+q2a11/ss = -0.999999x +0.001378y
+q2a11/corner_x = -675.651539
+q2a11/corner_y = -595.966654
+
+q2a12/min_fs = 776
+q2a12/min_ss = 1110
+q2a12/max_fs = 969
+q2a12/max_ss = 1294
+q2a12/fs = +0.999993x +0.003801y
+q2a12/ss = -0.003801x +0.999993y
+q2a12/corner_x = -433.463539
+q2a12/corner_y = -772.770654
+
+q2a13/min_fs = 970
+q2a13/min_ss = 1110
+q2a13/max_fs = 1163
+q2a13/max_ss = 1294
+q2a13/fs = +0.999993x +0.003801y
+q2a13/ss = -0.003801x +0.999993y
+q2a13/corner_x = -236.464539
+q2a13/corner_y = -772.021654
+
+q2a14/min_fs = 776
+q2a14/min_ss = 1295
+q2a14/max_fs = 969
+q2a14/max_ss = 1479
+q2a14/fs = +0.999998x +0.001814y
+q2a14/ss = -0.001814x +0.999998y
+q2a14/corner_x = -434.417539
+q2a14/corner_y = -559.833654
+
+q2a15/min_fs = 970
+q2a15/min_ss = 1295
+q2a15/max_fs = 1163
+q2a15/max_ss = 1479
+q2a15/fs = +0.999998x +0.001814y
+q2a15/ss = -0.001814x +0.999998y
+q2a15/corner_x = -237.417539
+q2a15/corner_y = -559.475654
+
+q3a0/min_fs = 1164
+q3a0/min_ss = 0
+q3a0/max_fs = 1357
+q3a0/max_ss = 184
+q3a0/fs = +0.999983x +0.005902y
+q3a0/ss = -0.005902x +0.999983y
+q3a0/corner_x = -28.098139
+q3a0/corner_y = -445.058654
+
+q3a1/min_fs = 1358
+q3a1/min_ss = 0
+q3a1/max_fs = 1551
+q3a1/max_ss = 184
+q3a1/fs = +0.999983x +0.005902y
+q3a1/ss = -0.005902x +0.999983y
+q3a1/corner_x = 168.898461
+q3a1/corner_y = -443.896654
+
+q3a2/min_fs = 1164
+q3a2/min_ss = 185
+q3a2/max_fs = 1357
+q3a2/max_ss = 369
+q3a2/fs = +1.000000x -0.000023y
+q3a2/ss = +0.000023x +1.000000y
+q3a2/corner_x = -29.736639
+q3a2/corner_y = -230.765654
+
+q3a3/min_fs = 1358
+q3a3/min_ss = 185
+q3a3/max_fs = 1551
+q3a3/max_ss = 369
+q3a3/fs = +1.000000x -0.000023y
+q3a3/ss = +0.000023x +1.000000y
+q3a3/corner_x = 167.263461
+q3a3/corner_y = -230.769654
+
+q3a4/min_fs = 1164
+q3a4/min_ss = 370
+q3a4/max_fs = 1357
+q3a4/max_ss = 554
+q3a4/fs = +0.005489x +0.999985y
+q3a4/ss = -0.999985x +0.005489y
+q3a4/corner_x = 368.813461
+q3a4/corner_y = -864.761654
+
+q3a5/min_fs = 1358
+q3a5/min_ss = 370
+q3a5/max_fs = 1551
+q3a5/max_ss = 554
+q3a5/fs = +0.005489x +0.999985y
+q3a5/ss = -0.999985x +0.005489y
+q3a5/corner_x = 369.895461
+q3a5/corner_y = -667.764654
+
+q3a6/min_fs = 1164
+q3a6/min_ss = 555
+q3a6/max_fs = 1357
+q3a6/max_ss = 739
+q3a6/fs = -0.000609x +1.000000y
+q3a6/ss = -1.000000x -0.000609y
+q3a6/corner_x = 157.554461
+q3a6/corner_y = -864.303654
+
+q3a7/min_fs = 1358
+q3a7/min_ss = 555
+q3a7/max_fs = 1551
+q3a7/max_ss = 739
+q3a7/fs = -0.000609x +1.000000y
+q3a7/ss = -1.000000x -0.000609y
+q3a7/corner_x = 157.434461
+q3a7/corner_y = -667.303654
+
+q3a8/min_fs = 1164
+q3a8/min_ss = 740
+q3a8/max_fs = 1357
+q3a8/max_ss = 924
+q3a8/fs = -0.999997x +0.002572y
+q3a8/ss = -0.002572x -0.999997y
+q3a8/corner_x = 792.161461
+q3a8/corner_y = -467.181654
+
+q3a9/min_fs = 1358
+q3a9/min_ss = 740
+q3a9/max_fs = 1551
+q3a9/max_ss = 924
+q3a9/fs = -0.999997x +0.002572y
+q3a9/ss = -0.002572x -0.999997y
+q3a9/corner_x = 595.162461
+q3a9/corner_y = -466.674654
+
+q3a10/min_fs = 1164
+q3a10/min_ss = 925
+q3a10/max_fs = 1357
+q3a10/max_ss = 1109
+q3a10/fs = -0.999999x +0.001378y
+q3a10/ss = -0.001378x -0.999999y
+q3a10/corner_x = 792.022461
+q3a10/corner_y = -679.298654
+
+q3a11/min_fs = 1358
+q3a11/min_ss = 925
+q3a11/max_fs = 1551
+q3a11/max_ss = 1109
+q3a11/fs = -0.999999x +0.001378y
+q3a11/ss = -0.001378x -0.999999y
+q3a11/corner_x = 595.022461
+q3a11/corner_y = -679.026654
+
+q3a12/min_fs = 1164
+q3a12/min_ss = 1110
+q3a12/max_fs = 1357
+q3a12/max_ss = 1294
+q3a12/fs = -0.003801x +0.999993y
+q3a12/ss = -0.999993x -0.003801y
+q3a12/corner_x = 771.826461
+q3a12/corner_y = -436.838654
+
+q3a13/min_fs = 1358
+q3a13/min_ss = 1110
+q3a13/max_fs = 1551
+q3a13/max_ss = 1294
+q3a13/fs = -0.003801x +0.999993y
+q3a13/ss = -0.999993x -0.003801y
+q3a13/corner_x = 771.077461
+q3a13/corner_y = -239.839654
+
+q3a14/min_fs = 1164
+q3a14/min_ss = 1295
+q3a14/max_fs = 1357
+q3a14/max_ss = 1479
+q3a14/fs = -0.001814x +0.999998y
+q3a14/ss = -0.999998x -0.001814y
+q3a14/corner_x = 558.889461
+q3a14/corner_y = -437.792654
+
+q3a15/min_fs = 1358
+q3a15/min_ss = 1295
+q3a15/max_fs = 1551
+q3a15/max_ss = 1479
+q3a15/fs = -0.001814x +0.999998y
+q3a15/ss = -0.999998x -0.001814y
+q3a15/corner_x = 558.531461
+q3a15/corner_y = -240.792654
+----- End geometry file -----
+----- Begin unit cell -----
+CrystFEL unit cell file version 1.0
+
+lattice_type = orthorhombic
+centering = C
+a = 61.40 A
+b = 122.60 A
+c = 168.00 A
+al = 90.00 deg
+be = 90.00 deg
+ga = 90.00 deg
+; Please note: this is the target unit cell.
+; The actual unit cells produced by indexing depend on many other factors.
+----- End unit cell -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003712_4e09.h5
+Image serial number: 1
+hit = 1
+indexed_by = none
+photon_energy_eV = 9543.778683
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9543.778683
+average_camera_length = 0.152004 m
+num_peaks = 6
+peak_resolution = 1.183101 nm^-1 or 8.452364 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 158.50 333.50 0.86 1106.71 q0a2
+ 53.50 337.50 0.48 902.15 q0a2
+ 428.50 257.50 0.88 1415.21 q1a2
+ 902.50 221.50 1.18 1315.47 q2a2
+ 839.50 258.50 0.87 6236.05 q2a2
+ 950.50 320.50 0.95 759.55 q2a2
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003730_684f.h5
+Image serial number: 3
+hit = 1
+indexed_by = none
+photon_energy_eV = 9483.268586
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9483.268586
+average_camera_length = 0.152004 m
+num_peaks = 9
+peak_resolution = 2.213443 nm^-1 or 4.517847 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 8.50 51.50 2.14 872.50 q0a0
+ 50.50 248.50 0.95 984.76 q0a2
+ 538.50 218.50 1.26 1783.65 q1a2
+ 525.50 280.50 0.94 985.85 q1a2
+ 683.50 1461.50 2.21 959.81 q1a15
+ 746.50 1477.50 2.05 1129.46 q1a15
+ 870.09 207.50 1.18 3093.18 q2a2
+ 839.24 258.50 0.87 8432.01 q2a2
+1233.50 276.00 0.80 4085.63 q3a2
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003717_55a7.h5
+Image serial number: 2
+hit = 1
+indexed_by = none
+photon_energy_eV = 9516.730551
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9516.730551
+average_camera_length = 0.152004 m
+num_peaks = 9
+peak_resolution = 2.455095 nm^-1 or 4.073162 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 137.50 1.50 2.46 849.61 q0a0
+ 58.50 195.50 1.24 1009.10 q0a2
+ 135.16 261.24 1.05 6542.97 q0a2
+ 120.50 318.50 0.75 1604.58 q0a2
+ 856.50 238.50 1.00 1041.53 q2a2
+ 958.50 324.50 0.98 1489.15 q2a2
+1017.50 338.50 1.25 2274.48 q2a3
+1457.50 106.50 2.31 978.31 q3a1
+1466.50 1430.50 2.37 667.23 q3a15
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003831_bd8d.h5
+Image serial number: 5
+hit = 1
+indexed_by = none
+photon_energy_eV = 9511.076692
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9511.076692
+average_camera_length = 0.152004 m
+num_peaks = 8
+peak_resolution = 1.209835 nm^-1 or 8.265592 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 22.50 279.50 0.78 5262.59 q0a2
+ 213.97 319.50 1.17 3021.38 q0a3
+ 426.50 260.50 0.86 1571.97 q1a2
+ 803.50 212.74 1.10 4674.39 q2a2
+ 917.50 300.50 0.88 857.88 q2a2
+ 819.50 302.50 0.61 764.33 q2a2
+1249.50 266.50 0.88 1329.84 q3a2
+1396.50 337.50 1.21 1184.50 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003832_bead.h5
+Image serial number: 6
+hit = 1
+indexed_by = xgandalf-nolatt-cell
+n_indexing_tries = 1
+photon_energy_eV = 9502.090941
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9502.090941
+average_camera_length = 0.152004 m
+num_peaks = 13
+peak_resolution = 2.526619 nm^-1 or 3.957858 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 118.50 320.50 0.73 888.88 q0a2
+ 703.50 133.50 2.26 1531.34 q1a1
+ 522.50 281.88 0.93 2940.01 q1a2
+ 567.50 324.50 0.95 823.23 q1a2
+ 773.50 288.50 2.04 1086.81 q1a3
+ 589.50 1436.50 2.53 14124.62 q1a15
+ 895.50 31.50 2.25 1018.68 q2a0
+1076.50 105.50 2.32 652.91 q2a1
+ 870.50 288.95 0.77 5658.91 q2a2
+1192.76 248.96 0.92 23534.57 q3a2
+1277.95 269.50 0.93 2150.22 q3a2
+1233.50 358.50 0.39 1855.34 q3a2
+1439.50 1435.04 2.39 1838.37 q3a15
+End of peak list
+--- Begin crystal
+Cell parameters 6.11908 12.12898 16.84658 nm, 90.02011 90.56393 90.36675 deg
+astar = +0.0377023 -0.1497985 +0.0533834 nm^-1
+bstar = -0.0496714 -0.0333043 -0.0567573 nm^-1
+cstar = +0.0454082 -0.0027983 -0.0381329 nm^-1
+lattice_type = triclinic
+centering = C
+unique_axis = ?
+profile_radius = 0.00216 nm^-1
+predict_refine/final_residual = 3.433081e-07
+predict_refine/det_shift x = -0.041 y = -0.015 mm
+diffraction_resolution_limit = 2.27 nm^-1 or 4.41 A
+num_reflections = 217
+num_saturated_reflections = 0
+num_implausible_reflections = 0
+Reflections measured after indexing
+ h k l I sigma(I) peak background fs/px ss/px panel
+ -26 16 -23 114.04 80.75 69.00 27.16 553.0 1004.6 q1a10
+ -25 9 -17 -37.80 65.78 59.00 31.20 712.2 993.0 q1a11
+ -25 13 -21 -21.59 61.88 60.00 31.79 624.5 975.2 q1a11
+ -24 0 -7 -168.78 121.59 147.00 45.98 500.5 482.6 q1a4
+ -23 -7 3 72.06 77.94 84.00 43.94 497.0 631.1 q1a6
+ -23 1 -9 -76.18 113.31 97.00 45.58 545.2 464.5 q1a4
+ -23 21 -29 -43.94 75.12 63.00 35.94 474.5 888.7 q1a8
+ -22 -8 4 129.93 127.05 151.00 45.67 529.4 658.9 q1a6
+ -22 10 -20 10.21 95.33 120.00 38.59 712.0 898.1 q1a9
+ -21 -13 13 -66.72 94.11 102.00 45.87 347.4 1158.2 q0a13
+ -21 1 -10 -108.05 113.33 116.00 54.45 616.9 476.7 q1a5
+ -21 5 -15 -45.84 86.80 79.00 46.04 638.1 389.2 q1a5
+ -20 -20 30 242.23 90.54 68.00 39.08 104.6 1130.0 q0a12
+ -20 -8 3 -279.20 136.54 131.00 60.80 600.6 665.9 q1a7
+ -20 18 -28 172.75 96.81 79.00 32.25 569.7 788.5 q1a8
+ -20 22 -31 2.91 64.27 65.00 33.29 488.3 770.7 q1a8
+ -19 -13 12 54.45 133.56 108.00 52.91 343.5 1232.6 q0a13
+ -19 -7 1 -208.25 106.73 99.00 63.25 642.4 646.1 q1a7
+ -19 9 -20 183.54 124.19 101.00 41.66 759.4 795.2 q1a9
+ -19 11 -22 220.50 96.45 101.00 40.50 718.9 785.6 q1a9
+ -19 13 -24 43.24 79.22 81.00 38.36 677.9 775.9 q1a9
+ -19 19 -29 -57.62 103.26 79.00 38.62 561.1 748.4 q1a8
+ -18 -24 43 -136.06 95.17 69.00 36.16 65.3 799.8 q0a8
+ -18 -20 29 114.22 81.82 88.00 42.93 105.9 1207.1 q0a12
+ -18 -6 -1 -115.46 159.83 209.00 69.66 683.3 626.6 q1a7
+ -18 6 -17 48.19 122.66 118.00 56.81 747.9 393.3 q1a5
+ -17 -25 47 -54.09 68.39 53.00 33.29 88.0 861.7 q0a8
+ -17 -19 26 89.49 132.11 115.00 47.32 141.5 1253.2 q0a12
+ -16 -22 35 -209.17 126.14 98.00 44.17 13.7 1258.0 q0a12
+ -16 -8 2 -131.66 308.67 330.00 86.91 738.1 687.6 q1a7
+ -16 16 -27 -200.05 127.53 119.00 57.45 439.0 1327.7 q1a14
+ -15 -27 58 13.24 69.56 55.00 22.36 124.3 1004.4 q0a10
+ -15 -25 47 172.59 191.27 230.00 38.25 163.4 868.2 q0a8
+ -15 21 -31 -87.49 87.68 87.00 37.89 495.7 1270.2 q1a12
+ -15 27 -35 -120.16 85.10 73.00 35.96 525.1 1153.5 q1a12
+ -14 -18 23 82.67 166.47 152.00 73.33 165.5 1337.8 q0a14
+ -14 -16 18 270.69 148.01 178.00 90.07 228.7 1353.4 q0a15
+ -14 0 -10 65.64 276.13 318.00 125.76 602.0 41.1 q1a1
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+ 21 19 32 -135.24 99.57 80.00 42.64 1203.7 461.3 q3a4
+End of reflections
+--- End crystal
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003834_c195.h5
+Image serial number: 8
+hit = 1
+indexed_by = none
+photon_energy_eV = 9505.892753
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9505.892753
+average_camera_length = 0.152004 m
+num_peaks = 9
+peak_resolution = 2.305863 nm^-1 or 4.336770 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 89.50 22.50 2.31 955.24 q0a0
+ 50.50 217.04 1.12 7581.80 q0a2
+ 267.50 247.50 1.61 1782.51 q0a3
+ 440.50 31.50 2.22 693.26 q1a0
+ 821.50 359.50 0.31 519.55 q2a2
+ 982.50 332.50 1.09 1203.56 q2a3
+1284.50 246.50 1.06 1320.97 q3a2
+1196.50 366.50 0.27 924.83 q3a2
+1407.50 353.50 1.24 2647.86 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003832_bf5b.h5
+Image serial number: 7
+hit = 1
+indexed_by = none
+photon_energy_eV = 9513.737262
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9513.737262
+average_camera_length = 0.152004 m
+num_peaks = 12
+peak_resolution = 2.253437 nm^-1 or 4.437667 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 25.98 150.50 1.63 1812.35 q0a0
+ 82.50 281.50 0.82 790.96 q0a2
+ 735.50 172.50 2.24 1197.42 q1a1
+ 583.50 183.50 1.68 880.74 q1a1
+ 390.50 246.63 0.95 10097.17 q1a2
+ 907.50 266.50 0.98 1047.21 q2a2
+ 830.50 368.50 0.28 720.25 q2a2
+1029.04 1474.50 2.25 2199.71 q2a15
+1193.50 70.50 2.02 1068.22 q3a0
+1272.50 240.50 1.06 1115.89 q3a2
+1245.50 333.07 0.54 2288.25 q3a2
+1513.50 342.50 1.80 1283.25 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003823_b32b.h5
+Image serial number: 4
+hit = 1
+indexed_by = none
+photon_energy_eV = 9517.205007
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9517.205007
+average_camera_length = 0.152004 m
+num_peaks = 13
+peak_resolution = 2.194077 nm^-1 or 4.557725 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 80.08 236.50 1.05 4987.84 q0a2
+ 21.50 279.50 0.78 1220.32 q0a2
+ 223.00 312.50 1.23 2088.75 q0a3
+ 514.04 235.50 1.12 1905.15 q1a2
+ 934.50 54.50 2.19 886.88 q2a0
+ 946.65 290.97 1.03 9956.53 q2a2
+ 825.50 323.50 0.51 1032.25 q2a2
+ 820.50 329.50 0.47 1265.77 q2a2
+ 913.50 331.50 0.75 2751.38 q2a2
+ 931.03 355.50 0.77 1790.38 q2a2
+ 804.50 367.50 0.25 1131.12 q2a2
+1275.50 339.50 0.62 1030.46 q3a2
+1390.50 282.01 1.32 2793.12 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003844_d09b.h5
+Image serial number: 10
+hit = 1
+indexed_by = none
+photon_energy_eV = 9507.362497
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996613
+hdf5/LCLS/photon_energy_eV = 9507.362497
+average_camera_length = 0.152003 m
+num_peaks = 9
+peak_resolution = 1.964806 nm^-1 or 5.089561 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 8.50 86.50 1.96 769.03 q0a0
+ 187.90 305.13 1.08 6305.05 q0a2
+ 120.50 320.50 0.74 958.91 q0a2
+ 810.50 211.50 1.11 1371.86 q2a2
+ 888.50 239.50 1.06 1503.04 q2a2
+ 777.50 253.50 0.89 1422.06 q2a2
+ 950.50 253.50 1.18 1014.03 q2a2
+ 820.50 321.50 0.51 827.10 q2a2
+ 845.50 359.50 0.37 965.25 q2a2
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003835_c2c7.h5
+Image serial number: 9
+hit = 1
+indexed_by = dirax-nolatt-nocell
+n_indexing_tries = 1
+photon_energy_eV = 9506.983752
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9506.983752
+average_camera_length = 0.152004 m
+num_peaks = 15
+peak_resolution = 2.245493 nm^-1 or 4.453364 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 74.50 227.50 1.09 874.23 q0a2
+ 89.50 280.50 0.84 4466.15 q0a2
+ 138.23 329.50 0.78 3321.50 q0a2
+ 55.50 362.50 0.35 1046.61 q0a2
+ 264.06 344.50 1.36 3895.06 q0a3
+ 536.50 191.50 1.38 1142.55 q1a2
+ 538.98 226.50 1.23 3024.86 q1a2
+ 434.50 247.87 0.93 9195.64 q1a2
+ 837.76 24.20 2.25 2621.50 q2a0
+ 844.06 327.98 0.52 6638.46 q2a2
+ 830.50 350.50 0.37 742.34 q2a2
+1079.50 307.50 1.62 748.31 q2a3
+1048.50 363.50 1.38 2200.32 q2a3
+1504.50 240.50 1.95 1111.97 q3a3
+1397.50 318.26 1.26 3360.83 q3a3
+End of peak list
+--- Begin crystal
+Cell parameters 6.14945 12.19310 16.53163 nm, 90.38238 90.42335 89.80075 deg
+astar = +0.0608119 -0.1353376 +0.0665692 nm^-1
+bstar = -0.0761488 -0.0264169 +0.0151696 nm^-1
+cstar = -0.0015432 -0.0276762 -0.0537686 nm^-1
+lattice_type = triclinic
+centering = C
+unique_axis = ?
+profile_radius = 0.00146 nm^-1
+predict_refine/final_residual = 4.422120e-07
+predict_refine/det_shift x = -0.199 y = -0.027 mm
+diffraction_resolution_limit = 1.63 nm^-1 or 6.14 A
+num_reflections = 132
+num_saturated_reflections = 0
+num_implausible_reflections = 0
+Reflections measured after indexing
+ h k l I sigma(I) peak background fs/px ss/px panel
+ -26 0 -10 0.00 9.98 0.00 0.00 441.8 401.8 q1a4
+ -26 24 1 91.43 70.88 66.00 35.17 422.0 905.5 q1a8
+ -25 23 0 -48.25 79.49 72.00 38.25 464.7 877.4 q1a8
+ -24 -6 -12 -83.11 86.42 85.00 47.51 471.3 530.9 q1a4
+ -24 22 -1 -103.81 87.33 71.00 40.81 506.0 850.3 q1a8
+ -23 -13 -13 173.76 100.88 96.00 50.64 457.3 628.6 q1a6
+ -23 -5 -12 66.74 113.37 132.00 50.86 514.2 530.5 q1a4
+ -23 9 -8 248.44 140.25 158.00 41.56 746.4 912.6 q1a9
+ -22 -4 -12 -140.00 202.48 235.00 57.00 556.0 530.1 q1a4
+ -22 4 -10 -130.14 102.13 102.00 56.74 609.3 406.3 q1a5
+ -22 14 -6 -123.80 66.35 75.00 45.20 682.5 842.9 q1a9
+ -21 1 -11 -9.22 112.03 126.00 59.02 621.6 468.5 q1a5
+ -20 26 1 36.16 90.98 95.00 40.04 412.5 1216.6 q1a12
+ -20 30 4 1.25 78.78 66.00 36.75 445.6 1141.3 q1a12
+ -19 -9 -13 41.27 107.83 118.00 72.53 620.1 620.1 q1a7
+ -18 26 1 15.66 109.07 131.00 43.54 475.7 1254.0 q1a12
+ -18 30 4 43.99 73.32 78.00 40.61 509.1 1180.7 q1a12
+ -17 -31 -12 225.84 128.76 121.00 47.96 164.1 1169.5 q0a12
+ -17 -25 -13 115.76 102.02 95.00 52.64 259.0 1210.5 q0a13
+ -17 31 5 77.15 111.19 94.00 41.65 549.2 1180.0 q1a12
+ -16 -44 -8 -119.56 112.71 93.00 40.56 20.5 787.8 q0a8
+ -16 -12 -13 585.65 243.18 315.00 92.15 697.2 701.8 q1a7
+ -15 -29 -12 147.34 159.78 133.00 54.46 177.2 1251.4 q0a12
+ -15 3 -10 -321.65 176.82 204.00 122.85 630.7 18.7 q1a1
+ -15 11 -7 623.95 206.94 217.00 123.45 749.9 72.1 q1a1
+ -15 19 -3 -292.19 199.25 217.00 90.19 512.9 1393.4 q1a14
+ -14 -2 -11 805.25 299.47 379.00 142.75 548.4 17.2 q1a0
+ -14 2 -10 -142.09 253.86 313.00 150.29 603.4 42.5 q1a1
+ -14 8 -8 258.40 169.79 326.00 140.40 691.3 81.7 q1a1
+ -13 -25 -12 -273.23 154.87 154.00 102.03 217.7 1314.6 q0a15
+ -13 7 -8 -181.21 280.30 331.00 154.41 663.7 104.9 q1a1
+ -12 -20 -12 19.24 199.24 273.00 120.36 283.5 1376.4 q0a15
+ -12 -18 -12 82.27 407.12 470.00 147.53 313.3 1388.5 q0a15
+ -12 -16 -12 -66.40 432.92 442.00 165.60 342.8 1400.4 q0a15
+ -10 -34 -9 101.12 124.66 125.00 74.88 46.4 1357.2 q0a14
+ -10 -20 -11 217.04 297.43 325.00 144.16 262.6 1438.2 q0a15
+ -10 -14 -11 -773.95 747.70 510.00 214.55 350.4 1472.9 q0a15
+ -10 22 1 510.57 293.48 312.00 117.83 681.5 1416.5 q1a15
+ -9 -25 -10 -517.77 448.82 349.00 136.97 179.8 1440.7 q0a14
+ -9 21 1 542.36 574.25 433.00 174.24 703.1 1445.3 q1a15
+ -9 35 12 63.15 133.95 139.00 62.65 991.5 706.0 q2a7
+ -9 37 14 -75.68 157.70 125.00 53.08 956.1 684.2 q2a6
+ -8 -28 -9 882.69 271.03 481.00 114.31 123.4 1455.0 q0a14
+ -8 32 10 -304.76 118.49 119.00 73.36 1060.3 705.9 q2a7
+ -8 40 18 113.56 124.65 121.00 48.44 910.2 617.3 q2a6
+ -7 -55 2 11.00 60.62 69.00 39.00 270.3 1072.3 q0a11
+ -7 -13 -9 -150.38 212.81 231.00 84.38 311.6 313.3 q0a3
+ -7 3 -6 3404.25 224.18 1610.00 41.75 538.5 226.7 q1a2
+ -7 11 -3 -38.96 145.11 173.00 60.16 648.8 279.8 q1a3
+ -7 13 -2 511.74 134.80 398.00 65.86 677.9 294.2 q1a3
+ -7 15 -1 167.50 165.61 194.00 73.50 707.1 308.7 q1a3
+ -7 31 10 496.38 188.57 225.00 78.62 1091.0 684.9 q2a7
+ -7 41 20 -127.28 89.23 86.00 44.48 903.6 572.5 q2a6
+ -7 45 25 47.84 100.46 175.00 40.96 813.7 542.9 q2a4
+ -6 -50 0 103.46 92.24 77.00 42.34 335.4 973.2 q0a11
+ -6 -48 -1 -13.99 87.67 77.00 42.39 346.5 932.3 q0a11
+ -6 -10 -8 4155.23 232.61 2253.00 63.98 265.0 345.1 q0a3
+ -6 30 10 824.94 277.22 468.00 93.06 1121.2 664.1 q2a7
+ -5 -9 -7 44.39 96.42 136.00 64.01 229.5 348.5 q0a3
+ -5 -3 -6 9530.21 324.50 5824.00 36.59 432.7 248.1 q1a2
+ -5 1 -5 333.36 106.91 166.00 37.24 488.3 272.5 q1a2
+ -5 7 -3 587.99 160.07 187.00 35.61 572.1 311.1 q1a2
+ -5 19 3 250.38 198.70 207.00 101.62 786.5 116.3 q2a0
+ -5 25 7 3555.27 304.80 1356.00 146.53 836.4 23.2 q2a0
+ -5 47 30 66.74 95.54 83.00 40.86 792.6 440.3 q2a4
+ -4 -36 -4 128.41 174.15 264.00 67.79 375.9 426.9 q0a5
+ -4 -32 -5 782.86 194.31 479.00 120.74 319.3 23.8 q0a1
+ -4 30 12 509.50 266.32 275.00 94.50 1145.7 601.7 q2a7
+ -3 -39 -2 -137.85 147.41 184.00 61.65 313.1 444.7 q0a5
+ -3 -27 -5 184.84 374.32 672.00 164.96 263.5 92.7 q0a1
+ -3 19 5 393.35 128.95 194.00 93.85 846.9 138.9 q2a0
+ -3 37 20 21.29 120.04 136.00 55.91 1030.9 517.8 q2a5
+ -2 -50 4 -4.34 69.72 64.00 37.54 93.2 426.7 q0a4
+ -2 -44 1 -113.61 115.95 108.00 51.01 210.5 454.3 q0a5
+ -2 -8 -4 3838.22 233.84 2503.00 51.98 137.7 330.5 q0a2
+ -2 44 30 290.05 92.95 82.00 40.55 898.9 379.4 q2a4
+ -1 -9 -3 1200.12 167.21 507.00 52.88 112.9 305.9 q0a2
+ -1 9 2 1345.50 146.88 486.00 49.50 833.1 276.6 q2a2
+ -1 45 33 85.64 108.17 110.00 31.76 1148.4 1001.3 q2a11
+ -1 47 36 68.29 84.38 86.00 32.91 1110.3 1050.7 q2a11
+ 0 -10 -2 4638.95 234.24 4520.00 52.45 88.2 281.3 q0a2
+ 0 6 2 6683.18 287.95 2043.00 56.42 843.1 329.3 q2a2
+ 0 32 19 -379.19 414.62 326.00 88.19 1155.6 476.3 q2a5
+ 0 34 21 97.41 187.94 206.00 69.79 1120.1 452.0 q2a5
+ 1 -13 -1 1653.11 157.85 926.00 46.49 73.2 228.3 q0a2
+ 1 27 16 594.41 207.43 557.00 132.79 1045.4 56.6 q2a1
+ 2 44 37 -109.50 87.25 73.00 37.50 1041.8 950.8 q2a11
+ 3 3 5 191.39 115.41 168.00 47.01 1184.0 303.3 q3a2
+ 3 23 16 1087.70 457.65 466.00 172.70 1074.5 140.3 q2a1
+ 4 -36 6 37.84 99.71 108.00 66.96 283.3 664.2 q0a7
+ 5 -37 8 -169.81 165.43 223.00 66.81 252.2 696.3 q0a7
+ 5 -11 5 4584.80 268.32 2674.00 63.80 1398.0 320.2 q3a3
+ 5 5 9 164.64 110.82 142.00 49.76 1177.2 223.4 q3a2
+ 5 27 23 -202.45 237.41 264.00 101.05 866.2 1464.3 q2a14
+ 6 -26 7 -116.12 538.52 402.00 156.12 1538.9 1410.9 q3a15
+ 6 10 13 -9.85 107.73 143.00 71.65 1065.5 335.8 q2a3
+ 6 12 14 2189.75 200.25 842.00 80.25 1081.2 307.2 q2a3
+ 6 32 30 -186.46 131.88 147.00 77.66 788.4 1359.4 q2a14
+ 7 21 22 -415.01 392.99 355.00 159.61 978.0 1453.2 q2a15
+ 8 -28 11 -233.89 252.01 304.00 107.49 1474.6 1352.5 q3a15
+ 8 -18 10 -508.06 654.61 540.00 193.06 1535.4 250.7 q3a3
+ 8 -16 10 1201.59 558.56 1240.00 139.21 1505.6 241.5 q3a3
+ 8 6 15 -97.96 153.84 185.00 107.16 1194.1 139.2 q3a0
+ 8 12 18 453.66 628.72 445.00 158.54 1155.4 327.5 q2a3
+ 9 -17 12 985.62 560.56 460.00 170.38 1533.1 209.3 q3a3
+ 9 -15 12 -301.20 471.14 466.00 143.80 1503.2 200.3 q3a3
+ 9 15 22 219.15 648.02 535.00 191.65 1088.7 1434.1 q2a15
+ 9 25 30 265.65 146.59 148.00 83.15 934.7 1322.3 q2a14
+ 10 -40 19 -256.45 115.30 86.00 41.05 1428.6 1133.3 q3a13
+ 10 16 25 -85.61 226.26 293.00 133.01 1083.5 1382.7 q2a15
+ 10 20 28 227.86 180.07 161.00 104.74 1021.7 1339.5 q2a15
+ 11 -37 20 -43.71 91.25 96.00 45.91 1380.7 1174.5 q3a13
+ 12 -24 19 -239.75 173.78 181.00 84.75 1306.2 1359.9 q3a14
+ 13 -31 23 -85.16 90.11 93.00 45.96 1282.2 1250.2 q3a12
+ 14 -32 26 -72.78 71.92 76.00 43.98 1237.3 1212.8 q3a12
+ 14 -22 24 -15.09 126.84 120.00 70.29 1210.1 1360.3 q3a14
+ 14 -12 24 50.76 160.44 212.00 117.64 1524.4 8.2 q3a1
+ 15 -29 28 87.81 128.15 116.00 45.19 1182.2 1248.6 q3a12
+ 15 -11 27 570.62 266.01 262.00 75.38 1538.0 405.7 q3a5
+ 15 5 32 -37.25 144.14 189.00 77.25 1425.4 617.5 q3a7
+ 16 -24 30 0.21 78.89 93.00 42.59 1389.4 756.5 q3a9
+ 16 -6 31 -228.60 202.18 256.00 68.40 1457.6 466.5 q3a5
+ 16 8 37 171.15 156.74 142.00 60.65 1343.6 650.7 q3a6
+ 17 -7 34 0.09 109.58 106.00 59.71 1410.0 435.1 q3a5
+ 18 -26 37 -5.75 96.59 85.00 41.75 1312.2 864.5 q3a8
+ 18 -2 39 -326.59 204.01 224.00 57.79 1317.8 496.1 q3a4
+ 18 6 43 -185.66 108.39 85.00 51.46 1241.0 593.6 q3a6
+ 19 -13 40 -116.62 102.98 108.00 45.62 1515.4 946.3 q3a11
+ 20 -30 46 -30.65 68.08 60.00 31.85 1174.7 971.4 q3a10
+ 20 -14 44 -61.99 78.42 107.00 43.39 1476.0 1011.4 q3a11
+ 20 -2 47 131.45 107.49 92.00 46.95 1179.6 460.7 q3a4
+ 21 -25 49 33.69 60.14 61.00 31.31 1246.3 1053.9 q3a10
+End of reflections
+--- End crystal
+----- End chunk -----
diff --git a/files/peaks.stream b/files/peaks.stream
new file mode 100644
index 0000000..f0b64ff
--- /dev/null
+++ b/files/peaks.stream
@@ -0,0 +1,1324 @@
+CrystFEL stream format 2.3
+Generated by CrystFEL 0.8.0+6e0da0f1
+/home/taw/crystfel/build/indexamajig -i files-10.lst -o test.stream -g 5HT2b-Liu-2013-predrefine.geom --peaks=peakfinder8 --threshold=800 --min-pix-count=1 --min-snr=3 -j 3 -p 5HT2B.cell
+Indexing methods selected: mosflm-cell-nolatt,mosflm-latt-nocell,dirax,asdf,xgandalf
+----- Begin geometry file -----
+adu_per_eV = 0.00105
+clen = /LCLS/detector0-EncoderValue
+coffset = 582.00e-3
+photon_energy = /LCLS/photon_energy_eV
+;photon_energy = 9000
+res = 9097.525473
+
+bad_thing/min_x = -390
+bad_thing/max_x = -270
+bad_thing/min_y = 820
+bad_thing/max_y = 890
+
+bad_sparkly/min_x = -220
+bad_sparkly/max_x = -180
+bad_sparkly/min_y = 30
+bad_sparkly/max_y = 235
+
+bad_squiggle/min_x = 80
+bad_squiggle/max_x = 180
+bad_squiggle/min_y = 595
+bad_squiggle/max_y = 640
+
+; The following lines define "rigid groups" which express the physical
+; construction of the detector. This is used when refining the detector
+; geometry.
+
+rigid_group_q0 = q0a0,q0a1,q0a2,q0a3,q0a4,q0a5,q0a6,q0a7,q0a8,q0a9,q0a10,q0a11,q0a12,q0a13,q0a14,q0a15
+rigid_group_q1 = q1a0,q1a1,q1a2,q1a3,q1a4,q1a5,q1a6,q1a7,q1a8,q1a9,q1a10,q1a11,q1a12,q1a13,q1a14,q1a15
+rigid_group_q2 = q2a0,q2a1,q2a2,q2a3,q2a4,q2a5,q2a6,q2a7,q2a8,q2a9,q2a10,q2a11,q2a12,q2a13,q2a14,q2a15
+rigid_group_q3 = q3a0,q3a1,q3a2,q3a3,q3a4,q3a5,q3a6,q3a7,q3a8,q3a9,q3a10,q3a11,q3a12,q3a13,q3a14,q3a15
+
+rigid_group_a0 = q0a0,q0a1
+rigid_group_a1 = q0a2,q0a3
+rigid_group_a2 = q0a4,q0a5
+rigid_group_a3 = q0a6,q0a7
+rigid_group_a4 = q0a8,q0a9
+rigid_group_a5 = q0a10,q0a11
+rigid_group_a6 = q0a12,q0a13
+rigid_group_a7 = q0a14,q0a15
+rigid_group_a8 = q1a0,q1a1
+rigid_group_a9 = q1a2,q1a3
+rigid_group_a10 = q1a4,q1a5
+rigid_group_a11 = q1a6,q1a7
+rigid_group_a12 = q1a8,q1a9
+rigid_group_a13 = q1a10,q1a11
+rigid_group_a14 = q1a12,q1a13
+rigid_group_a15 = q1a14,q1a15
+rigid_group_a16 = q2a0,q2a1
+rigid_group_a17 = q2a2,q2a3
+rigid_group_a18 = q2a4,q2a5
+rigid_group_a19 = q2a6,q2a7
+rigid_group_a20 = q2a8,q2a9
+rigid_group_a21 = q2a10,q2a11
+rigid_group_a22 = q2a12,q2a13
+rigid_group_a23 = q2a14,q2a15
+rigid_group_a24 = q3a0,q3a1
+rigid_group_a25 = q3a2,q3a3
+rigid_group_a26 = q3a4,q3a5
+rigid_group_a27 = q3a6,q3a7
+rigid_group_a28 = q3a8,q3a9
+rigid_group_a29 = q3a10,q3a11
+rigid_group_a30 = q3a12,q3a13
+rigid_group_a31 = q3a14,q3a15
+
+rigid_group_collection_quadrants = q0,q1,q2,q3
+rigid_group_collection_asics = a0,a1,a2,a3,a4,a5,a6,a7,a8,a9,a10,a11,a12,a13,a14,a15,a16,a17,a18,a19,a20,a21,a22,a23,a24,a25,a26,a27,a28,a29,a30,a31
+
+q0a0/min_fs = 0
+q0a0/min_ss = 0
+q0a0/max_fs = 193
+q0a0/max_ss = 184
+q0a0/fs = -0.005902x +0.999983y
+q0a0/ss = -0.999983x -0.005902y
+q0a0/corner_x = 449.314461
+q0a0/corner_y = -28.273254
+
+q0a1/min_fs = 194
+q0a1/min_ss = 0
+q0a1/max_fs = 387
+q0a1/max_ss = 184
+q0a1/fs = -0.005902x +0.999983y
+q0a1/ss = -0.999983x -0.005902y
+q0a1/corner_x = 448.152461
+q0a1/corner_y = 168.723346
+
+q0a2/min_fs = 0
+q0a2/min_ss = 185
+q0a2/max_fs = 193
+q0a2/max_ss = 369
+q0a2/fs = +0.000023x +1.000000y
+q0a2/ss = -1.000000x +0.000023y
+q0a2/corner_x = 235.021461
+q0a2/corner_y = -29.911754
+
+q0a3/min_fs = 194
+q0a3/min_ss = 185
+q0a3/max_fs = 387
+q0a3/max_ss = 369
+q0a3/fs = +0.000023x +1.000000y
+q0a3/ss = -1.000000x +0.000023y
+q0a3/corner_x = 235.025461
+q0a3/corner_y = 167.088346
+
+q0a4/min_fs = 0
+q0a4/min_ss = 370
+q0a4/max_fs = 193
+q0a4/max_ss = 554
+q0a4/fs = -0.999985x +0.005489y
+q0a4/ss = -0.005489x -0.999985y
+q0a4/corner_x = 869.017461
+q0a4/corner_y = 368.638346
+
+q0a5/min_fs = 194
+q0a5/min_ss = 370
+q0a5/max_fs = 387
+q0a5/max_ss = 554
+q0a5/fs = -0.999985x +0.005489y
+q0a5/ss = -0.005489x -0.999985y
+q0a5/corner_x = 672.020461
+q0a5/corner_y = 369.720346
+
+q0a6/min_fs = 0
+q0a6/min_ss = 555
+q0a6/max_fs = 193
+q0a6/max_ss = 739
+q0a6/fs = -1.000000x -0.000609y
+q0a6/ss = +0.000609x -1.000000y
+q0a6/corner_x = 868.559461
+q0a6/corner_y = 157.379346
+
+q0a7/min_fs = 194
+q0a7/min_ss = 555
+q0a7/max_fs = 387
+q0a7/max_ss = 739
+q0a7/fs = -1.000000x -0.000609y
+q0a7/ss = +0.000609x -1.000000y
+q0a7/corner_x = 671.559461
+q0a7/corner_y = 157.259346
+
+q0a8/min_fs = 0
+q0a8/min_ss = 740
+q0a8/max_fs = 193
+q0a8/max_ss = 924
+q0a8/fs = -0.002572x -0.999997y
+q0a8/ss = +0.999997x -0.002572y
+q0a8/corner_x = 471.437461
+q0a8/corner_y = 791.986346
+
+q0a9/min_fs = 194
+q0a9/min_ss = 740
+q0a9/max_fs = 387
+q0a9/max_ss = 924
+q0a9/fs = -0.002572x -0.999997y
+q0a9/ss = +0.999997x -0.002572y
+q0a9/corner_x = 470.930461
+q0a9/corner_y = 594.987346
+
+q0a10/min_fs = 0
+q0a10/min_ss = 925
+q0a10/max_fs = 193
+q0a10/max_ss = 1109
+q0a10/fs = -0.001378x -0.999999y
+q0a10/ss = +0.999999x -0.001378y
+q0a10/corner_x = 683.554461
+q0a10/corner_y = 791.847346
+
+q0a11/min_fs = 194
+q0a11/min_ss = 925
+q0a11/max_fs = 387
+q0a11/max_ss = 1109
+q0a11/fs = -0.001378x -0.999999y
+q0a11/ss = +0.999999x -0.001378y
+q0a11/corner_x = 683.282461
+q0a11/corner_y = 594.847346
+
+q0a12/min_fs = 0
+q0a12/min_ss = 1110
+q0a12/max_fs = 193
+q0a12/max_ss = 1294
+q0a12/fs = -0.999993x -0.003801y
+q0a12/ss = +0.003801x -0.999993y
+q0a12/corner_x = 441.094461
+q0a12/corner_y = 771.651346
+
+q0a13/min_fs = 194
+q0a13/min_ss = 1110
+q0a13/max_fs = 387
+q0a13/max_ss = 1294
+q0a13/fs = -0.999993x -0.003801y
+q0a13/ss = +0.003801x -0.999993y
+q0a13/corner_x = 244.095461
+q0a13/corner_y = 770.902346
+
+q0a14/min_fs = 0
+q0a14/min_ss = 1295
+q0a14/max_fs = 193
+q0a14/max_ss = 1479
+q0a14/fs = -0.999998x -0.001814y
+q0a14/ss = +0.001814x -0.999998y
+q0a14/corner_x = 442.048461
+q0a14/corner_y = 558.714346
+
+q0a15/min_fs = 194
+q0a15/min_ss = 1295
+q0a15/max_fs = 387
+q0a15/max_ss = 1479
+q0a15/fs = -0.999998x -0.001814y
+q0a15/ss = +0.001814x -0.999998y
+q0a15/corner_x = 245.048461
+q0a15/corner_y = 558.356346
+
+q1a0/min_fs = 388
+q1a0/min_ss = 0
+q1a0/max_fs = 581
+q1a0/max_ss = 184
+q1a0/fs = -0.999983x -0.005902y
+q1a0/ss = +0.005902x -0.999983y
+q1a0/corner_x = 31.029061
+q1a0/corner_y = 445.239346
+
+q1a1/min_fs = 582
+q1a1/min_ss = 0
+q1a1/max_fs = 775
+q1a1/max_ss = 184
+q1a1/fs = -0.999983x -0.005902y
+q1a1/ss = +0.005902x -0.999983y
+q1a1/corner_x = -165.967539
+q1a1/corner_y = 444.077346
+
+q1a2/min_fs = 388
+q1a2/min_ss = 185
+q1a2/max_fs = 581
+q1a2/max_ss = 369
+q1a2/fs = -1.000000x +0.000023y
+q1a2/ss = -0.000023x -1.000000y
+q1a2/corner_x = 32.667561
+q1a2/corner_y = 230.946346
+
+q1a3/min_fs = 582
+q1a3/min_ss = 185
+q1a3/max_fs = 775
+q1a3/max_ss = 369
+q1a3/fs = -1.000000x +0.000023y
+q1a3/ss = -0.000023x -1.000000y
+q1a3/corner_x = -164.332539
+q1a3/corner_y = 230.950346
+
+q1a4/min_fs = 388
+q1a4/min_ss = 370
+q1a4/max_fs = 581
+q1a4/max_ss = 554
+q1a4/fs = -0.005489x -0.999985y
+q1a4/ss = +0.999985x -0.005489y
+q1a4/corner_x = -365.882539
+q1a4/corner_y = 864.942346
+
+q1a5/min_fs = 582
+q1a5/min_ss = 370
+q1a5/max_fs = 775
+q1a5/max_ss = 554
+q1a5/fs = -0.005489x -0.999985y
+q1a5/ss = +0.999985x -0.005489y
+q1a5/corner_x = -366.964539
+q1a5/corner_y = 667.945346
+
+q1a6/min_fs = 388
+q1a6/min_ss = 555
+q1a6/max_fs = 581
+q1a6/max_ss = 739
+q1a6/fs = +0.000609x -1.000000y
+q1a6/ss = +1.000000x +0.000609y
+q1a6/corner_x = -154.623539
+q1a6/corner_y = 864.484346
+
+q1a7/min_fs = 582
+q1a7/min_ss = 555
+q1a7/max_fs = 775
+q1a7/max_ss = 739
+q1a7/fs = +0.000609x -1.000000y
+q1a7/ss = +1.000000x +0.000609y
+q1a7/corner_x = -154.503539
+q1a7/corner_y = 667.484346
+
+q1a8/min_fs = 388
+q1a8/min_ss = 740
+q1a8/max_fs = 581
+q1a8/max_ss = 924
+q1a8/fs = +0.999997x -0.002572y
+q1a8/ss = +0.002572x +0.999997y
+q1a8/corner_x = -789.230539
+q1a8/corner_y = 467.362346
+
+q1a9/min_fs = 582
+q1a9/min_ss = 740
+q1a9/max_fs = 775
+q1a9/max_ss = 924
+q1a9/fs = +0.999997x -0.002572y
+q1a9/ss = +0.002572x +0.999997y
+q1a9/corner_x = -592.231539
+q1a9/corner_y = 466.855346
+
+q1a10/min_fs = 388
+q1a10/min_ss = 925
+q1a10/max_fs = 581
+q1a10/max_ss = 1109
+q1a10/fs = +0.999999x -0.001378y
+q1a10/ss = +0.001378x +0.999999y
+q1a10/corner_x = -789.091539
+q1a10/corner_y = 679.479346
+
+q1a11/min_fs = 582
+q1a11/min_ss = 925
+q1a11/max_fs = 775
+q1a11/max_ss = 1109
+q1a11/fs = +0.999999x -0.001378y
+q1a11/ss = +0.001378x +0.999999y
+q1a11/corner_x = -592.091539
+q1a11/corner_y = 679.207346
+
+q1a12/min_fs = 388
+q1a12/min_ss = 1110
+q1a12/max_fs = 581
+q1a12/max_ss = 1294
+q1a12/fs = +0.003801x -0.999993y
+q1a12/ss = +0.999993x +0.003801y
+q1a12/corner_x = -768.895539
+q1a12/corner_y = 437.019346
+
+q1a13/min_fs = 582
+q1a13/min_ss = 1110
+q1a13/max_fs = 775
+q1a13/max_ss = 1294
+q1a13/fs = +0.003801x -0.999993y
+q1a13/ss = +0.999993x +0.003801y
+q1a13/corner_x = -768.146539
+q1a13/corner_y = 240.020346
+
+q1a14/min_fs = 388
+q1a14/min_ss = 1295
+q1a14/max_fs = 581
+q1a14/max_ss = 1479
+q1a14/fs = +0.001814x -0.999998y
+q1a14/ss = +0.999998x +0.001814y
+q1a14/corner_x = -555.958539
+q1a14/corner_y = 437.973346
+
+q1a15/min_fs = 582
+q1a15/min_ss = 1295
+q1a15/max_fs = 775
+q1a15/max_ss = 1479
+q1a15/fs = +0.001814x -0.999998y
+q1a15/ss = +0.999998x +0.001814y
+q1a15/corner_x = -555.600539
+q1a15/corner_y = 240.973346
+
+q2a0/min_fs = 776
+q2a0/min_ss = 0
+q2a0/max_fs = 969
+q2a0/max_ss = 184
+q2a0/fs = +0.005902x -0.999983y
+q2a0/ss = +0.999983x +0.005902y
+q2a0/corner_x = -441.683539
+q2a0/corner_y = 27.153946
+
+q2a1/min_fs = 970
+q2a1/min_ss = 0
+q2a1/max_fs = 1163
+q2a1/max_ss = 184
+q2a1/fs = +0.005902x -0.999983y
+q2a1/ss = +0.999983x +0.005902y
+q2a1/corner_x = -440.521539
+q2a1/corner_y = -169.842654
+
+q2a2/min_fs = 776
+q2a2/min_ss = 185
+q2a2/max_fs = 969
+q2a2/max_ss = 369
+q2a2/fs = -0.000023x -1.000000y
+q2a2/ss = +1.000000x -0.000023y
+q2a2/corner_x = -227.390539
+q2a2/corner_y = 28.792446
+
+q2a3/min_fs = 970
+q2a3/min_ss = 185
+q2a3/max_fs = 1163
+q2a3/max_ss = 369
+q2a3/fs = -0.000023x -1.000000y
+q2a3/ss = +1.000000x -0.000023y
+q2a3/corner_x = -227.394539
+q2a3/corner_y = -168.207654
+
+q2a4/min_fs = 776
+q2a4/min_ss = 370
+q2a4/max_fs = 969
+q2a4/max_ss = 554
+q2a4/fs = +0.999985x -0.005489y
+q2a4/ss = +0.005489x +0.999985y
+q2a4/corner_x = -861.386539
+q2a4/corner_y = -369.757654
+
+q2a5/min_fs = 970
+q2a5/min_ss = 370
+q2a5/max_fs = 1163
+q2a5/max_ss = 554
+q2a5/fs = +0.999985x -0.005489y
+q2a5/ss = +0.005489x +0.999985y
+q2a5/corner_x = -664.389539
+q2a5/corner_y = -370.839654
+
+q2a6/min_fs = 776
+q2a6/min_ss = 555
+q2a6/max_fs = 969
+q2a6/max_ss = 739
+q2a6/fs = +1.000000x +0.000609y
+q2a6/ss = -0.000609x +1.000000y
+q2a6/corner_x = -860.928539
+q2a6/corner_y = -158.498654
+
+q2a7/min_fs = 970
+q2a7/min_ss = 555
+q2a7/max_fs = 1163
+q2a7/max_ss = 739
+q2a7/fs = +1.000000x +0.000609y
+q2a7/ss = -0.000609x +1.000000y
+q2a7/corner_x = -663.928539
+q2a7/corner_y = -158.378654
+
+q2a8/min_fs = 776
+q2a8/min_ss = 740
+q2a8/max_fs = 969
+q2a8/max_ss = 924
+q2a8/fs = +0.002572x +0.999997y
+q2a8/ss = -0.999997x +0.002572y
+q2a8/corner_x = -463.806539
+q2a8/corner_y = -793.105654
+
+q2a9/min_fs = 970
+q2a9/min_ss = 740
+q2a9/max_fs = 1163
+q2a9/max_ss = 924
+q2a9/fs = +0.002572x +0.999997y
+q2a9/ss = -0.999997x +0.002572y
+q2a9/corner_x = -463.299539
+q2a9/corner_y = -596.106654
+
+q2a10/min_fs = 776
+q2a10/min_ss = 925
+q2a10/max_fs = 969
+q2a10/max_ss = 1109
+q2a10/fs = +0.001378x +0.999999y
+q2a10/ss = -0.999999x +0.001378y
+q2a10/corner_x = -675.923539
+q2a10/corner_y = -792.966654
+
+q2a11/min_fs = 970
+q2a11/min_ss = 925
+q2a11/max_fs = 1163
+q2a11/max_ss = 1109
+q2a11/fs = +0.001378x +0.999999y
+q2a11/ss = -0.999999x +0.001378y
+q2a11/corner_x = -675.651539
+q2a11/corner_y = -595.966654
+
+q2a12/min_fs = 776
+q2a12/min_ss = 1110
+q2a12/max_fs = 969
+q2a12/max_ss = 1294
+q2a12/fs = +0.999993x +0.003801y
+q2a12/ss = -0.003801x +0.999993y
+q2a12/corner_x = -433.463539
+q2a12/corner_y = -772.770654
+
+q2a13/min_fs = 970
+q2a13/min_ss = 1110
+q2a13/max_fs = 1163
+q2a13/max_ss = 1294
+q2a13/fs = +0.999993x +0.003801y
+q2a13/ss = -0.003801x +0.999993y
+q2a13/corner_x = -236.464539
+q2a13/corner_y = -772.021654
+
+q2a14/min_fs = 776
+q2a14/min_ss = 1295
+q2a14/max_fs = 969
+q2a14/max_ss = 1479
+q2a14/fs = +0.999998x +0.001814y
+q2a14/ss = -0.001814x +0.999998y
+q2a14/corner_x = -434.417539
+q2a14/corner_y = -559.833654
+
+q2a15/min_fs = 970
+q2a15/min_ss = 1295
+q2a15/max_fs = 1163
+q2a15/max_ss = 1479
+q2a15/fs = +0.999998x +0.001814y
+q2a15/ss = -0.001814x +0.999998y
+q2a15/corner_x = -237.417539
+q2a15/corner_y = -559.475654
+
+q3a0/min_fs = 1164
+q3a0/min_ss = 0
+q3a0/max_fs = 1357
+q3a0/max_ss = 184
+q3a0/fs = +0.999983x +0.005902y
+q3a0/ss = -0.005902x +0.999983y
+q3a0/corner_x = -28.098139
+q3a0/corner_y = -445.058654
+
+q3a1/min_fs = 1358
+q3a1/min_ss = 0
+q3a1/max_fs = 1551
+q3a1/max_ss = 184
+q3a1/fs = +0.999983x +0.005902y
+q3a1/ss = -0.005902x +0.999983y
+q3a1/corner_x = 168.898461
+q3a1/corner_y = -443.896654
+
+q3a2/min_fs = 1164
+q3a2/min_ss = 185
+q3a2/max_fs = 1357
+q3a2/max_ss = 369
+q3a2/fs = +1.000000x -0.000023y
+q3a2/ss = +0.000023x +1.000000y
+q3a2/corner_x = -29.736639
+q3a2/corner_y = -230.765654
+
+q3a3/min_fs = 1358
+q3a3/min_ss = 185
+q3a3/max_fs = 1551
+q3a3/max_ss = 369
+q3a3/fs = +1.000000x -0.000023y
+q3a3/ss = +0.000023x +1.000000y
+q3a3/corner_x = 167.263461
+q3a3/corner_y = -230.769654
+
+q3a4/min_fs = 1164
+q3a4/min_ss = 370
+q3a4/max_fs = 1357
+q3a4/max_ss = 554
+q3a4/fs = +0.005489x +0.999985y
+q3a4/ss = -0.999985x +0.005489y
+q3a4/corner_x = 368.813461
+q3a4/corner_y = -864.761654
+
+q3a5/min_fs = 1358
+q3a5/min_ss = 370
+q3a5/max_fs = 1551
+q3a5/max_ss = 554
+q3a5/fs = +0.005489x +0.999985y
+q3a5/ss = -0.999985x +0.005489y
+q3a5/corner_x = 369.895461
+q3a5/corner_y = -667.764654
+
+q3a6/min_fs = 1164
+q3a6/min_ss = 555
+q3a6/max_fs = 1357
+q3a6/max_ss = 739
+q3a6/fs = -0.000609x +1.000000y
+q3a6/ss = -1.000000x -0.000609y
+q3a6/corner_x = 157.554461
+q3a6/corner_y = -864.303654
+
+q3a7/min_fs = 1358
+q3a7/min_ss = 555
+q3a7/max_fs = 1551
+q3a7/max_ss = 739
+q3a7/fs = -0.000609x +1.000000y
+q3a7/ss = -1.000000x -0.000609y
+q3a7/corner_x = 157.434461
+q3a7/corner_y = -667.303654
+
+q3a8/min_fs = 1164
+q3a8/min_ss = 740
+q3a8/max_fs = 1357
+q3a8/max_ss = 924
+q3a8/fs = -0.999997x +0.002572y
+q3a8/ss = -0.002572x -0.999997y
+q3a8/corner_x = 792.161461
+q3a8/corner_y = -467.181654
+
+q3a9/min_fs = 1358
+q3a9/min_ss = 740
+q3a9/max_fs = 1551
+q3a9/max_ss = 924
+q3a9/fs = -0.999997x +0.002572y
+q3a9/ss = -0.002572x -0.999997y
+q3a9/corner_x = 595.162461
+q3a9/corner_y = -466.674654
+
+q3a10/min_fs = 1164
+q3a10/min_ss = 925
+q3a10/max_fs = 1357
+q3a10/max_ss = 1109
+q3a10/fs = -0.999999x +0.001378y
+q3a10/ss = -0.001378x -0.999999y
+q3a10/corner_x = 792.022461
+q3a10/corner_y = -679.298654
+
+q3a11/min_fs = 1358
+q3a11/min_ss = 925
+q3a11/max_fs = 1551
+q3a11/max_ss = 1109
+q3a11/fs = -0.999999x +0.001378y
+q3a11/ss = -0.001378x -0.999999y
+q3a11/corner_x = 595.022461
+q3a11/corner_y = -679.026654
+
+q3a12/min_fs = 1164
+q3a12/min_ss = 1110
+q3a12/max_fs = 1357
+q3a12/max_ss = 1294
+q3a12/fs = -0.003801x +0.999993y
+q3a12/ss = -0.999993x -0.003801y
+q3a12/corner_x = 771.826461
+q3a12/corner_y = -436.838654
+
+q3a13/min_fs = 1358
+q3a13/min_ss = 1110
+q3a13/max_fs = 1551
+q3a13/max_ss = 1294
+q3a13/fs = -0.003801x +0.999993y
+q3a13/ss = -0.999993x -0.003801y
+q3a13/corner_x = 771.077461
+q3a13/corner_y = -239.839654
+
+q3a14/min_fs = 1164
+q3a14/min_ss = 1295
+q3a14/max_fs = 1357
+q3a14/max_ss = 1479
+q3a14/fs = -0.001814x +0.999998y
+q3a14/ss = -0.999998x -0.001814y
+q3a14/corner_x = 558.889461
+q3a14/corner_y = -437.792654
+
+q3a15/min_fs = 1358
+q3a15/min_ss = 1295
+q3a15/max_fs = 1551
+q3a15/max_ss = 1479
+q3a15/fs = -0.001814x +0.999998y
+q3a15/ss = -0.999998x -0.001814y
+q3a15/corner_x = 558.531461
+q3a15/corner_y = -240.792654
+----- End geometry file -----
+----- Begin unit cell -----
+CrystFEL unit cell file version 1.0
+
+lattice_type = orthorhombic
+centering = C
+a = 61.40 A
+b = 122.60 A
+c = 168.00 A
+al = 90.00 deg
+be = 90.00 deg
+ga = 90.00 deg
+; Please note: this is the target unit cell.
+; The actual unit cells produced by indexing depend on many other factors.
+----- End unit cell -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003712_4e09.h5
+Image serial number: 1
+hit = 1
+indexed_by = none
+photon_energy_eV = 9543.778683
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9543.778683
+average_camera_length = 0.152004 m
+num_peaks = 6
+peak_resolution = 1.183101 nm^-1 or 8.452364 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 158.50 333.50 0.86 1106.71 q0a2
+ 53.50 337.50 0.48 902.15 q0a2
+ 428.50 257.50 0.88 1415.21 q1a2
+ 902.50 221.50 1.18 1315.47 q2a2
+ 839.50 258.50 0.87 6236.05 q2a2
+ 950.50 320.50 0.95 759.55 q2a2
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003730_684f.h5
+Image serial number: 3
+hit = 1
+indexed_by = none
+photon_energy_eV = 9483.268586
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9483.268586
+average_camera_length = 0.152004 m
+num_peaks = 9
+peak_resolution = 2.213443 nm^-1 or 4.517847 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 8.50 51.50 2.14 872.50 q0a0
+ 50.50 248.50 0.95 984.76 q0a2
+ 538.50 218.50 1.26 1783.65 q1a2
+ 525.50 280.50 0.94 985.85 q1a2
+ 683.50 1461.50 2.21 959.81 q1a15
+ 746.50 1477.50 2.05 1129.46 q1a15
+ 870.09 207.50 1.18 3093.18 q2a2
+ 839.24 258.50 0.87 8432.01 q2a2
+1233.50 276.00 0.80 4085.63 q3a2
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003717_55a7.h5
+Image serial number: 2
+hit = 1
+indexed_by = none
+photon_energy_eV = 9516.730551
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9516.730551
+average_camera_length = 0.152004 m
+num_peaks = 9
+peak_resolution = 2.455095 nm^-1 or 4.073162 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 137.50 1.50 2.46 849.61 q0a0
+ 58.50 195.50 1.24 1009.10 q0a2
+ 135.16 261.24 1.05 6542.97 q0a2
+ 120.50 318.50 0.75 1604.58 q0a2
+ 856.50 238.50 1.00 1041.53 q2a2
+ 958.50 324.50 0.98 1489.15 q2a2
+1017.50 338.50 1.25 2274.48 q2a3
+1457.50 106.50 2.31 978.31 q3a1
+1466.50 1430.50 2.37 667.23 q3a15
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003831_bd8d.h5
+Image serial number: 5
+hit = 1
+indexed_by = none
+photon_energy_eV = 9511.076692
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9511.076692
+average_camera_length = 0.152004 m
+num_peaks = 8
+peak_resolution = 1.209835 nm^-1 or 8.265592 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 22.50 279.50 0.78 5262.59 q0a2
+ 213.97 319.50 1.17 3021.38 q0a3
+ 426.50 260.50 0.86 1571.97 q1a2
+ 803.50 212.74 1.10 4674.39 q2a2
+ 917.50 300.50 0.88 857.88 q2a2
+ 819.50 302.50 0.61 764.33 q2a2
+1249.50 266.50 0.88 1329.84 q3a2
+1396.50 337.50 1.21 1184.50 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003832_bead.h5
+Image serial number: 6
+hit = 1
+indexed_by = xgandalf-nolatt-cell
+n_indexing_tries = 1
+photon_energy_eV = 9502.090941
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9502.090941
+average_camera_length = 0.152004 m
+num_peaks = 13
+peak_resolution = 2.526619 nm^-1 or 3.957858 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 118.50 320.50 0.73 888.88 q0a2
+ 703.50 133.50 2.26 1531.34 q1a1
+ 522.50 281.88 0.93 2940.01 q1a2
+ 567.50 324.50 0.95 823.23 q1a2
+ 773.50 288.50 2.04 1086.81 q1a3
+ 589.50 1436.50 2.53 14124.62 q1a15
+ 895.50 31.50 2.25 1018.68 q2a0
+1076.50 105.50 2.32 652.91 q2a1
+ 870.50 288.95 0.77 5658.91 q2a2
+1192.76 248.96 0.92 23534.57 q3a2
+1277.95 269.50 0.93 2150.22 q3a2
+1233.50 358.50 0.39 1855.34 q3a2
+1439.50 1435.04 2.39 1838.37 q3a15
+End of peak list
+--- Begin crystal
+Cell parameters 6.11908 12.12898 16.84658 nm, 90.02011 90.56393 90.36675 deg
+astar = +0.0377023 -0.1497985 +0.0533834 nm^-1
+bstar = -0.0496714 -0.0333043 -0.0567573 nm^-1
+cstar = +0.0454082 -0.0027983 -0.0381329 nm^-1
+lattice_type = triclinic
+centering = C
+unique_axis = ?
+profile_radius = 0.00216 nm^-1
+predict_refine/final_residual = 3.433081e-07
+predict_refine/det_shift x = -0.041 y = -0.015 mm
+diffraction_resolution_limit = 2.27 nm^-1 or 4.41 A
+num_reflections = 217
+num_saturated_reflections = 0
+num_implausible_reflections = 0
+Reflections measured after indexing
+ h k l I sigma(I) peak background fs/px ss/px panel
+ -26 16 -23 114.04 80.75 69.00 27.16 553.0 1004.6 q1a10
+ -25 9 -17 -37.80 65.78 59.00 31.20 712.2 993.0 q1a11
+ -25 13 -21 -21.59 61.88 60.00 31.79 624.5 975.2 q1a11
+ -24 0 -7 -168.78 121.59 147.00 45.98 500.5 482.6 q1a4
+ -23 -7 3 72.06 77.94 84.00 43.94 497.0 631.1 q1a6
+ -23 1 -9 -76.18 113.31 97.00 45.58 545.2 464.5 q1a4
+ -23 21 -29 -43.94 75.12 63.00 35.94 474.5 888.7 q1a8
+ -22 -8 4 129.93 127.05 151.00 45.67 529.4 658.9 q1a6
+ -22 10 -20 10.21 95.33 120.00 38.59 712.0 898.1 q1a9
+ -21 -13 13 -66.72 94.11 102.00 45.87 347.4 1158.2 q0a13
+ -21 1 -10 -108.05 113.33 116.00 54.45 616.9 476.7 q1a5
+ -21 5 -15 -45.84 86.80 79.00 46.04 638.1 389.2 q1a5
+ -20 -20 30 242.23 90.54 68.00 39.08 104.6 1130.0 q0a12
+ -20 -8 3 -279.20 136.54 131.00 60.80 600.6 665.9 q1a7
+ -20 18 -28 172.75 96.81 79.00 32.25 569.7 788.5 q1a8
+ -20 22 -31 2.91 64.27 65.00 33.29 488.3 770.7 q1a8
+ -19 -13 12 54.45 133.56 108.00 52.91 343.5 1232.6 q0a13
+ -19 -7 1 -208.25 106.73 99.00 63.25 642.4 646.1 q1a7
+ -19 9 -20 183.54 124.19 101.00 41.66 759.4 795.2 q1a9
+ -19 11 -22 220.50 96.45 101.00 40.50 718.9 785.6 q1a9
+ -19 13 -24 43.24 79.22 81.00 38.36 677.9 775.9 q1a9
+ -19 19 -29 -57.62 103.26 79.00 38.62 561.1 748.4 q1a8
+ -18 -24 43 -136.06 95.17 69.00 36.16 65.3 799.8 q0a8
+ -18 -20 29 114.22 81.82 88.00 42.93 105.9 1207.1 q0a12
+ -18 -6 -1 -115.46 159.83 209.00 69.66 683.3 626.6 q1a7
+ -18 6 -17 48.19 122.66 118.00 56.81 747.9 393.3 q1a5
+ -17 -25 47 -54.09 68.39 53.00 33.29 88.0 861.7 q0a8
+ -17 -19 26 89.49 132.11 115.00 47.32 141.5 1253.2 q0a12
+ -16 -22 35 -209.17 126.14 98.00 44.17 13.7 1258.0 q0a12
+ -16 -8 2 -131.66 308.67 330.00 86.91 738.1 687.6 q1a7
+ -16 16 -27 -200.05 127.53 119.00 57.45 439.0 1327.7 q1a14
+ -15 -27 58 13.24 69.56 55.00 22.36 124.3 1004.4 q0a10
+ -15 -25 47 172.59 191.27 230.00 38.25 163.4 868.2 q0a8
+ -15 21 -31 -87.49 87.68 87.00 37.89 495.7 1270.2 q1a12
+ -15 27 -35 -120.16 85.10 73.00 35.96 525.1 1153.5 q1a12
+ -14 -18 23 82.67 166.47 152.00 73.33 165.5 1337.8 q0a14
+ -14 -16 18 270.69 148.01 178.00 90.07 228.7 1353.4 q0a15
+ -14 0 -10 65.64 276.13 318.00 125.76 602.0 41.1 q1a1
+ -14 4 -15 -248.66 280.73 336.00 118.46 684.1 61.3 q1a1
+ -14 16 -27 -39.70 102.00 101.00 64.30 503.7 1350.4 q1a14
+ -14 24 -33 67.35 111.55 87.00 31.85 543.1 1225.4 q1a12
+ -13 -23 39 -166.51 103.79 73.00 36.32 258.3 763.3 q0a9
+ -13 -21 32 65.52 108.57 110.00 64.05 42.1 1344.1 q0a14
+ -13 -19 26 -232.64 145.67 136.00 74.01 121.6 1362.0 q0a14
+ -13 -15 16 198.45 146.41 193.00 98.34 250.6 1392.5 q0a15
+ -13 5 -16 86.89 250.77 355.00 125.51 693.9 97.3 q1a1
+ -13 15 -26 -216.86 166.86 157.00 77.26 530.3 1381.2 q1a14
+ -13 29 -36 167.40 80.07 67.00 35.40 598.5 1142.2 q1a13
+ -12 -14 14 -173.45 262.63 240.00 121.23 272.1 1430.7 q0a15
+ -12 -12 10 -1062.01 586.83 447.00 178.63 326.1 1443.4 q0a15
+ -12 -10 6 -1060.95 636.09 463.00 196.63 379.5 1455.8 q0a15
+ -12 -4 -4 167.18 165.91 306.00 110.14 500.5 81.7 q1a0
+ -12 6 -17 3052.55 307.40 1679.00 134.05 703.6 132.9 q1a1
+ -12 14 -25 -561.44 289.77 267.00 92.44 556.2 1411.4 q1a14
+ -12 26 -34 -92.55 80.36 70.00 38.95 614.8 1214.1 q1a13
+ -11 -27 61 83.74 58.52 55.00 23.86 265.5 1055.7 q0a11
+ -11 -25 49 1.22 76.10 91.00 37.24 299.5 906.6 q0a9
+ -11 -23 40 83.29 104.51 102.00 42.44 324.5 782.9 q0a9
+ -11 -21 33 -129.78 127.41 125.00 70.63 22.3 1408.7 q0a14
+ -11 -19 27 176.92 149.56 147.00 80.31 101.3 1425.5 q0a14
+ -11 -5 -2 6.85 125.00 163.00 94.35 467.1 106.2 q1a0
+ -11 -1 -8 509.90 198.08 309.00 93.06 554.8 127.4 q1a0
+ -10 -26 56 313.34 80.32 57.00 23.46 316.9 981.2 q0a11
+ -10 -10 7 266.91 410.97 430.00 104.43 364.2 338.2 q0a3
+ -10 -6 0 252.44 123.73 165.00 82.56 434.0 130.6 q1a0
+ -10 0 -9 13.55 166.55 189.00 80.95 565.0 162.2 q1a0
+ -9 -17 23 36.71 371.94 308.00 125.68 378.1 152.0 q0a1
+ -9 7 -17 407.14 159.95 208.00 66.26 688.7 199.6 q1a3
+ -9 13 -23 329.88 327.88 356.00 113.12 638.2 1467.6 q1a15
+ -9 31 -36 360.84 101.44 249.00 36.96 737.3 1163.0 q1a13
+ -9 33 -37 -152.76 104.87 98.00 38.36 749.4 1125.2 q1a13
+ -8 22 -30 143.80 117.06 147.00 82.80 716.3 1316.3 q1a15
+ -8 30 -35 69.11 99.14 78.00 34.49 762.4 1197.2 q1a13
+ -7 -25 55 18.86 92.87 82.00 35.96 141.7 378.0 q0a4
+ -7 -23 45 8.55 107.88 78.00 42.29 278.2 400.6 q0a5
+ -7 -11 11 -80.04 123.33 129.00 62.65 282.4 275.4 q0a3
+ -7 -9 7 -26.12 91.72 94.00 58.37 270.9 327.7 q0a3
+ -7 -3 -3 562.35 138.65 625.00 34.28 466.1 204.6 q1a2
+ -7 9 -18 66.38 152.30 174.00 65.62 700.4 267.8 q1a3
+ -7 11 -20 -33.16 276.83 299.00 84.96 737.2 278.4 q1a3
+ -7 37 -38 34.39 63.30 70.00 38.01 840.2 697.5 q2a6
+ -6 -12 14 -37.87 113.82 104.00 57.49 259.5 234.0 q0a3
+ -6 30 -34 -131.06 128.81 135.00 54.06 984.5 712.5 q2a7
+ -6 32 -35 40.55 129.21 124.00 44.05 951.2 699.6 q2a6
+ -6 36 -37 135.50 73.45 75.00 38.50 876.1 673.1 q2a6
+ -5 -25 61 -167.37 77.99 64.00 34.35 53.6 438.2 q0a4
+ -5 -23 49 152.56 96.50 103.00 43.15 221.9 460.9 q0a5
+ -5 -15 22 439.69 155.98 382.00 111.23 247.9 157.1 q0a1
+ -5 -11 13 28.63 101.33 100.00 58.99 225.3 245.4 q0a3
+ -5 -9 9 47.99 95.53 112.00 54.63 214.2 297.7 q0a3
+ -5 1 -7 3293.78 210.09 1859.00 32.02 521.4 282.2 q1a2
+ -5 33 -35 -203.40 189.69 186.00 50.60 948.4 662.7 q2a6
+ -4 -24 57 75.65 91.06 102.00 37.15 112.0 481.0 q0a4
+ -4 -16 26 247.29 305.58 280.00 132.32 224.9 105.1 q0a1
+ -4 4 -10 1169.11 179.27 859.00 32.49 566.4 326.0 q1a2
+ -3 -5 4 64.27 147.15 127.00 45.71 139.6 362.3 q0a2
+ -3 13 -19 -1.06 118.27 133.00 81.06 791.0 142.6 q2a0
+ -3 27 -30 5.89 137.55 160.00 67.51 1087.0 642.3 q2a7
+ -2 -14 24 775.88 196.93 251.00 89.96 159.1 130.1 q0a0
+ -2 -6 7 1537.19 162.58 942.00 47.14 117.0 321.7 q0a2
+ -2 12 -17 -50.43 104.27 133.00 76.83 813.7 176.6 q2a0
+ -2 14 -19 550.88 149.26 531.00 85.12 824.8 140.1 q2a0
+ -2 30 -31 87.95 106.33 105.00 54.45 1050.0 593.0 q2a7
+ -1 -21 50 75.71 86.49 91.00 47.56 208.3 569.9 q0a7
+ -1 13 -17 82.45 106.38 255.00 81.95 847.4 174.0 q2a0
+ -1 21 -24 1147.33 379.57 1149.00 128.07 894.2 32.1 q2a0
+ -1 25 -27 -44.11 292.85 296.00 82.51 1154.5 597.1 q2a7
+ -1 43 -36 -84.50 75.23 62.00 37.50 832.2 490.5 q2a4
+ 0 -22 60 -87.91 81.87 65.00 31.57 71.4 594.3 q0a6
+ 0 -6 10 -55.85 79.45 74.00 42.38 61.2 283.2 q0a2
+ 0 40 -34 -127.09 145.23 177.00 43.29 907.3 484.9 q2a4
+ 0 46 -36 59.81 79.76 68.00 35.19 793.9 432.0 q2a4
+ 1 -15 33 45.04 169.76 183.00 120.96 77.2 17.0 q0a0
+ 1 7 -8 5621.49 249.55 3161.00 44.32 870.0 290.7 q2a2
+ 1 43 -34 60.28 74.56 77.00 34.52 871.3 427.6 q2a4
+ 2 -20 57 41.53 76.25 88.00 37.27 117.1 669.7 q0a6
+ 2 -16 39 -546.56 314.24 240.00 83.26 357.4 688.2 q0a7
+ 2 -12 27 -227.46 178.37 202.00 101.85 33.5 95.2 q0a0
+ 2 -10 22 -140.56 129.52 136.00 81.26 24.2 159.1 q0a0
+ 2 0 3 302.91 1037.11 1969.00 185.86 1232.3 360.3 q3a2
+ 2 2 0 -523.57 1072.87 630.00 208.48 1189.8 349.8 q3a2
+ 2 18 -18 -294.36 274.75 279.00 104.76 961.7 136.7 q2a0
+ 2 32 -28 -143.72 139.84 152.00 57.52 1085.6 488.2 q2a5
+ 2 38 -31 -49.79 99.19 83.00 47.59 979.2 440.2 q2a5
+ 3 -19 56 134.76 91.43 90.00 39.03 132.7 706.7 q0a6
+ 3 -17 46 27.73 86.81 87.00 52.31 266.5 714.4 q0a7
+ 3 7 -5 -108.20 127.51 106.00 43.80 926.0 329.0 q2a2
+ 3 13 -12 -72.93 154.89 117.00 53.33 960.2 215.3 q2a2
+ 3 29 -25 -44.05 362.34 293.00 76.45 1156.6 481.1 q2a5
+ 3 41 -31 80.34 87.09 89.00 36.46 948.0 383.0 q2a4
+ 3 47 -33 -92.16 119.50 81.00 28.96 1151.5 1051.1 q2a11
+ 4 -12 32 451.58 420.98 355.00 138.42 1544.7 1438.3 q3a15
+ 4 -8 22 196.06 152.60 249.00 65.61 1476.7 343.1 q3a3
+ 4 -2 10 400.14 174.90 356.00 46.94 1322.1 314.0 q3a2
+ 4 20 -17 -121.73 182.23 411.00 128.53 1028.7 138.5 q2a1
+ 5 -9 27 109.53 536.73 401.00 128.81 1538.4 318.0 q3a3
+ 5 -7 22 -13.62 166.04 204.00 72.83 1474.6 309.3 q3a3
+ 5 -3 14 -164.54 132.66 139.00 59.62 1369.0 290.1 q3a3
+ 5 1 7 2827.65 190.79 1247.00 45.88 1277.1 270.1 q3a2
+ 5 5 1 24841.43 512.16 8839.00 46.48 1191.5 249.0 q3a2
+ 5 23 -18 1127.81 358.98 804.00 147.19 1077.6 105.3 q2a1
+ 5 27 -21 308.09 162.29 219.00 107.71 1105.5 35.5 q2a1
+ 5 49 -31 9.31 47.05 50.00 30.69 1064.9 1046.9 q2a11
+ 6 -14 46 -62.64 143.02 136.00 53.01 1488.2 1287.6 q3a13
+ 6 12 -6 210.31 102.70 128.00 58.69 1037.0 294.8 q2a3
+ 6 28 -20 -11.71 212.73 241.00 102.91 1143.3 39.4 q2a1
+ 7 -15 56 11.65 67.00 64.00 36.15 1453.6 1153.1 q3a13
+ 7 -11 39 139.47 138.04 156.00 82.42 1446.5 1355.5 q3a15
+ 7 -9 33 2136.04 279.17 1100.00 106.96 1439.6 1433.9 q3a15
+ 7 -5 23 -190.29 284.35 309.00 87.03 1480.3 240.1 q3a3
+ 7 -1 15 -286.00 242.53 286.00 64.57 1374.0 221.5 q3a3
+ 7 3 8 325.27 103.80 186.00 45.42 1281.6 201.8 q3a2
+ 7 53 -29 -181.74 144.13 103.00 26.14 953.0 1079.6 q2a10
+ 8 -14 57 127.34 84.84 81.00 35.91 1414.4 1141.8 q3a13
+ 8 -12 47 -210.99 89.52 74.00 45.65 1414.3 1279.8 q3a13
+ 8 8 3 266.77 111.39 525.00 81.92 1200.9 174.2 q3a0
+ 8 12 -2 147.77 201.80 213.00 76.92 1095.8 341.6 q2a3
+ 8 30 -18 -66.11 140.13 159.00 76.51 819.0 1435.2 q2a14
+ 8 44 -25 21.43 76.64 84.00 38.17 1017.9 914.1 q2a9
+ 9 -13 58 117.48 65.55 71.00 34.95 1374.7 1130.4 q3a13
+ 9 -11 48 -213.49 126.24 126.00 46.54 1376.1 1269.7 q3a13
+ 9 3 13 117.30 176.11 176.00 77.38 1337.8 169.7 q3a0
+ 9 9 4 -99.12 133.23 153.00 92.33 1207.0 138.3 q3a0
+ 9 13 -1 -651.78 410.58 389.00 99.63 1132.0 347.4 q2a3
+ 9 23 -11 44.82 478.38 379.00 117.58 962.9 1457.7 q2a14
+ 9 43 -23 -63.21 75.68 62.00 36.41 995.2 873.4 q2a9
+ 10 -8 42 368.97 147.80 137.00 69.10 1337.4 1327.2 q3a14
+ 10 4 14 790.50 238.05 379.00 95.50 1344.6 133.5 q3a0
+ 10 10 5 73.12 175.10 292.00 105.04 1213.0 102.0 q3a0
+ 10 28 -13 170.91 174.39 178.00 82.29 898.7 1388.7 q2a14
+ 10 38 -19 -47.18 80.70 74.00 40.58 1012.2 761.5 q2a9
+ 11 -5 37 590.54 156.10 184.00 79.72 1294.5 1398.4 q3a14
+ 11 -1 27 -405.57 358.14 362.00 134.09 1511.4 122.0 q3a1
+ 11 7 12 83.15 379.11 432.00 137.38 1307.4 86.4 q3a0
+ 11 9 9 -158.42 250.08 311.00 124.89 1263.3 75.8 q3a0
+ 11 17 -1 6.24 595.65 459.00 168.36 1118.4 1436.9 q2a15
+ 11 19 -3 -72.55 341.84 461.00 134.71 1081.8 1423.2 q2a15
+ 11 21 -5 -204.24 341.45 359.00 114.64 1044.8 1409.4 q2a15
+ 11 31 -13 -22.62 130.55 147.00 65.62 871.4 1331.6 q2a14
+ 11 45 -20 -263.47 115.71 97.00 40.27 907.3 860.3 q2a8
+ 12 -2 33 28.87 106.26 123.00 75.53 1250.1 1457.4 q3a14
+ 12 2 24 -397.45 270.62 329.00 125.29 1464.2 76.3 q3a1
+ 12 14 5 -880.33 306.29 296.00 141.93 1189.6 14.7 q3a0
+ 12 48 -19 163.19 73.42 77.00 34.81 835.6 888.9 q2a8
+ 12 52 -20 67.26 66.85 55.00 26.14 783.7 935.8 q2a10
+ 13 -7 56 33.70 74.40 68.00 35.70 1210.4 1175.1 q3a12
+ 13 -1 35 -70.64 128.01 132.00 75.01 1209.2 1437.6 q3a14
+ 13 1 30 -335.83 153.56 162.00 101.83 1538.0 44.1 q3a1
+ 13 9 15 -91.27 244.07 260.00 124.17 1330.2 9.1 q3a0
+ 13 19 2 51.31 236.15 218.00 106.69 1138.3 1357.9 q2a15
+ 13 23 -2 -169.02 149.49 171.00 93.22 1063.7 1329.2 q2a15
+ 14 46 -14 115.86 82.31 77.00 35.74 785.4 798.2 q2a8
+ 15 -3 53 206.96 85.92 77.00 37.84 1303.2 753.0 q3a8
+ 15 17 10 -187.49 257.35 297.00 82.48 1473.6 678.0 q3a7
+ 15 29 -2 -229.90 111.12 108.00 54.10 1013.6 1238.8 q2a13
+ 16 -2 57 65.00 78.45 60.00 33.00 1250.9 806.0 q3a8
+ 16 2 42 -3.56 66.99 67.00 40.26 1462.5 798.1 q3a9
+ 16 6 32 -162.62 99.10 98.00 56.83 1491.9 390.8 q3a5
+ 16 10 24 562.58 173.32 248.00 62.89 1475.4 505.0 q3a5
+ 16 18 12 -67.68 94.62 106.00 66.22 1430.3 662.1 q3a7
+ 16 30 0 54.18 97.06 93.00 50.42 1027.2 1192.9 q2a13
+ 17 -1 62 217.17 91.23 69.00 31.43 1181.5 865.9 q3a8
+ 17 13 23 -29.47 88.08 89.00 55.40 1419.9 533.2 q3a5
+ 17 17 17 -91.05 125.52 124.00 63.45 1397.4 599.1 q3a7
+ 17 21 12 35.56 120.77 131.00 62.44 1370.3 683.5 q3a7
+ 18 2 57 -31.94 64.26 56.00 33.94 1264.2 910.6 q3a8
+ 18 4 49 -203.81 117.83 116.00 40.51 1379.5 901.6 q3a9
+ 18 6 43 159.90 72.44 108.00 39.06 1466.8 901.3 q3a9
+ 18 24 12 38.82 140.14 136.00 52.06 1311.4 705.7 q3a6
+ 18 28 8 5.26 84.27 79.00 48.14 1135.2 1131.3 q2a13
+ 19 3 63 -76.75 71.89 56.00 28.75 1179.2 952.8 q3a10
+ 19 23 17 64.27 117.11 167.00 47.55 1275.9 641.0 q3a6
+ 20 12 40 135.25 99.59 88.00 35.75 1534.2 989.4 q3a11
+ 20 16 32 169.25 83.72 79.00 42.75 1270.7 443.2 q3a4
+ 20 24 20 -157.30 102.63 92.00 46.70 1222.4 613.7 q3a6
+ 21 11 50 -141.18 85.15 84.00 33.58 1396.2 1053.4 q3a11
+ 21 19 32 -135.24 99.57 80.00 42.64 1203.7 461.3 q3a4
+End of reflections
+--- End crystal
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003834_c195.h5
+Image serial number: 8
+hit = 1
+indexed_by = none
+photon_energy_eV = 9505.892753
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9505.892753
+average_camera_length = 0.152004 m
+num_peaks = 9
+peak_resolution = 2.305863 nm^-1 or 4.336770 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 89.50 22.50 2.31 955.24 q0a0
+ 50.50 217.04 1.12 7581.80 q0a2
+ 267.50 247.50 1.61 1782.51 q0a3
+ 440.50 31.50 2.22 693.26 q1a0
+ 821.50 359.50 0.31 519.55 q2a2
+ 982.50 332.50 1.09 1203.56 q2a3
+1284.50 246.50 1.06 1320.97 q3a2
+1196.50 366.50 0.27 924.83 q3a2
+1407.50 353.50 1.24 2647.86 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003832_bf5b.h5
+Image serial number: 7
+hit = 1
+indexed_by = none
+photon_energy_eV = 9513.737262
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9513.737262
+average_camera_length = 0.152004 m
+num_peaks = 12
+peak_resolution = 2.253437 nm^-1 or 4.437667 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 25.98 150.50 1.63 1812.35 q0a0
+ 82.50 281.50 0.82 790.96 q0a2
+ 735.50 172.50 2.24 1197.42 q1a1
+ 583.50 183.50 1.68 880.74 q1a1
+ 390.50 246.63 0.95 10097.17 q1a2
+ 907.50 266.50 0.98 1047.21 q2a2
+ 830.50 368.50 0.28 720.25 q2a2
+1029.04 1474.50 2.25 2199.71 q2a15
+1193.50 70.50 2.02 1068.22 q3a0
+1272.50 240.50 1.06 1115.89 q3a2
+1245.50 333.07 0.54 2288.25 q3a2
+1513.50 342.50 1.80 1283.25 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003823_b32b.h5
+Image serial number: 4
+hit = 1
+indexed_by = none
+photon_energy_eV = 9517.205007
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9517.205007
+average_camera_length = 0.152004 m
+num_peaks = 13
+peak_resolution = 2.194077 nm^-1 or 4.557725 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 80.08 236.50 1.05 4987.84 q0a2
+ 21.50 279.50 0.78 1220.32 q0a2
+ 223.00 312.50 1.23 2088.75 q0a3
+ 514.04 235.50 1.12 1905.15 q1a2
+ 934.50 54.50 2.19 886.88 q2a0
+ 946.65 290.97 1.03 9956.53 q2a2
+ 825.50 323.50 0.51 1032.25 q2a2
+ 820.50 329.50 0.47 1265.77 q2a2
+ 913.50 331.50 0.75 2751.38 q2a2
+ 931.03 355.50 0.77 1790.38 q2a2
+ 804.50 367.50 0.25 1131.12 q2a2
+1275.50 339.50 0.62 1030.46 q3a2
+1390.50 282.01 1.32 2793.12 q3a3
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003844_d09b.h5
+Image serial number: 10
+hit = 1
+indexed_by = none
+photon_energy_eV = 9507.362497
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996613
+hdf5/LCLS/photon_energy_eV = 9507.362497
+average_camera_length = 0.152003 m
+num_peaks = 9
+peak_resolution = 1.964806 nm^-1 or 5.089561 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 8.50 86.50 1.96 769.03 q0a0
+ 187.90 305.13 1.08 6305.05 q0a2
+ 120.50 320.50 0.74 958.91 q0a2
+ 810.50 211.50 1.11 1371.86 q2a2
+ 888.50 239.50 1.06 1503.04 q2a2
+ 777.50 253.50 0.89 1422.06 q2a2
+ 950.50 253.50 1.18 1014.03 q2a2
+ 820.50 321.50 0.51 827.10 q2a2
+ 845.50 359.50 0.37 965.25 q2a2
+End of peak list
+----- End chunk -----
+----- Begin chunk -----
+Image filename: wait-test/LCLS_2013_Mar23_r0131_003835_c2c7.h5
+Image serial number: 9
+hit = 1
+indexed_by = dirax-nolatt-nocell
+n_indexing_tries = 1
+photon_energy_eV = 9506.983752
+beam_divergence = 0.00e+00 rad
+beam_bandwidth = 1.00e-08 (fraction)
+hdf5/LCLS/detector0-EncoderValue = -429.996399
+hdf5/LCLS/photon_energy_eV = 9506.983752
+average_camera_length = 0.152004 m
+num_peaks = 15
+peak_resolution = 2.245493 nm^-1 or 4.453364 A
+Peaks from peak search
+ fs/px ss/px (1/d)/nm^-1 Intensity Panel
+ 74.50 227.50 1.09 874.23 q0a2
+ 89.50 280.50 0.84 4466.15 q0a2
+ 138.23 329.50 0.78 3321.50 q0a2
+ 55.50 362.50 0.35 1046.61 q0a2
+ 264.06 344.50 1.36 3895.06 q0a3
+ 536.50 191.50 1.38 1142.55 q1a2
+ 538.98 226.50 1.23 3024.86 q1a2
+ 434.50 247.87 0.93 9195.64 q1a2
+ 837.76 24.20 2.25 2621.50 q2a0
+ 844.06 327.98 0.52 6638.46 q2a2
+ 830.50 350.50 0.37 742.34 q2a2
+1079.50 307.50 1.62 748.31 q2a3
+1048.50 363.50 1.38 2200.32 q2a3
+1504.50 240.50 1.95 1111.97 q3a3
+1397.50 318.26 1.26 3360.83 q3a3
+End of peak list
+--- Begin crystal
+Cell parameters 6.14945 12.19310 16.53163 nm, 90.38238 90.42335 89.80075 deg
+astar = +0.0608119 -0.1353376 +0.0665692 nm^-1
+bstar = -0.0761488 -0.0264169 +0.0151696 nm^-1
+cstar = -0.0015432 -0.0276762 -0.0537686 nm^-1
+lattice_type = triclinic
+centering = C
+unique_axis = ?
+profile_radius = 0.00146 nm^-1
+predict_refine/final_residual = 4.422120e-07
+predict_refine/det_shift x = -0.199 y = -0.027 mm
+diffraction_resolution_limit = 1.63 nm^-1 or 6.14 A
+num_reflections = 132
+num_saturated_reflections = 0
+num_implausible_reflections = 0
+Reflections measured after indexing
+ h k l I sigma(I) peak background fs/px ss/px panel
+ -26 0 -10 0.00 9.98 0.00 0.00 441.8 401.8 q1a4
+ -26 24 1 91.43 70.88 66.00 35.17 422.0 905.5 q1a8
+ -25 23 0 -48.25 79.49 72.00 38.25 464.7 877.4 q1a8
+ -24 -6 -12 -83.11 86.42 85.00 47.51 471.3 530.9 q1a4
+ -24 22 -1 -103.81 87.33 71.00 40.81 506.0 850.3 q1a8
+ -23 -13 -13 173.76 100.88 96.00 50.64 457.3 628.6 q1a6
+ -23 -5 -12 66.74 113.37 132.00 50.86 514.2 530.5 q1a4
+ -23 9 -8 248.44 140.25 158.00 41.56 746.4 912.6 q1a9
+ -22 -4 -12 -140.00 202.48 235.00 57.00 556.0 530.1 q1a4
+ -22 4 -10 -130.14 102.13 102.00 56.74 609.3 406.3 q1a5
+ -22 14 -6 -123.80 66.35 75.00 45.20 682.5 842.9 q1a9
+ -21 1 -11 -9.22 112.03 126.00 59.02 621.6 468.5 q1a5
+ -20 26 1 36.16 90.98 95.00 40.04 412.5 1216.6 q1a12
+ -20 30 4 1.25 78.78 66.00 36.75 445.6 1141.3 q1a12
+ -19 -9 -13 41.27 107.83 118.00 72.53 620.1 620.1 q1a7
+ -18 26 1 15.66 109.07 131.00 43.54 475.7 1254.0 q1a12
+ -18 30 4 43.99 73.32 78.00 40.61 509.1 1180.7 q1a12
+ -17 -31 -12 225.84 128.76 121.00 47.96 164.1 1169.5 q0a12
+ -17 -25 -13 115.76 102.02 95.00 52.64 259.0 1210.5 q0a13
+ -17 31 5 77.15 111.19 94.00 41.65 549.2 1180.0 q1a12
+ -16 -44 -8 -119.56 112.71 93.00 40.56 20.5 787.8 q0a8
+ -16 -12 -13 585.65 243.18 315.00 92.15 697.2 701.8 q1a7
+ -15 -29 -12 147.34 159.78 133.00 54.46 177.2 1251.4 q0a12
+ -15 3 -10 -321.65 176.82 204.00 122.85 630.7 18.7 q1a1
+ -15 11 -7 623.95 206.94 217.00 123.45 749.9 72.1 q1a1
+ -15 19 -3 -292.19 199.25 217.00 90.19 512.9 1393.4 q1a14
+ -14 -2 -11 805.25 299.47 379.00 142.75 548.4 17.2 q1a0
+ -14 2 -10 -142.09 253.86 313.00 150.29 603.4 42.5 q1a1
+ -14 8 -8 258.40 169.79 326.00 140.40 691.3 81.7 q1a1
+ -13 -25 -12 -273.23 154.87 154.00 102.03 217.7 1314.6 q0a15
+ -13 7 -8 -181.21 280.30 331.00 154.41 663.7 104.9 q1a1
+ -12 -20 -12 19.24 199.24 273.00 120.36 283.5 1376.4 q0a15
+ -12 -18 -12 82.27 407.12 470.00 147.53 313.3 1388.5 q0a15
+ -12 -16 -12 -66.40 432.92 442.00 165.60 342.8 1400.4 q0a15
+ -10 -34 -9 101.12 124.66 125.00 74.88 46.4 1357.2 q0a14
+ -10 -20 -11 217.04 297.43 325.00 144.16 262.6 1438.2 q0a15
+ -10 -14 -11 -773.95 747.70 510.00 214.55 350.4 1472.9 q0a15
+ -10 22 1 510.57 293.48 312.00 117.83 681.5 1416.5 q1a15
+ -9 -25 -10 -517.77 448.82 349.00 136.97 179.8 1440.7 q0a14
+ -9 21 1 542.36 574.25 433.00 174.24 703.1 1445.3 q1a15
+ -9 35 12 63.15 133.95 139.00 62.65 991.5 706.0 q2a7
+ -9 37 14 -75.68 157.70 125.00 53.08 956.1 684.2 q2a6
+ -8 -28 -9 882.69 271.03 481.00 114.31 123.4 1455.0 q0a14
+ -8 32 10 -304.76 118.49 119.00 73.36 1060.3 705.9 q2a7
+ -8 40 18 113.56 124.65 121.00 48.44 910.2 617.3 q2a6
+ -7 -55 2 11.00 60.62 69.00 39.00 270.3 1072.3 q0a11
+ -7 -13 -9 -150.38 212.81 231.00 84.38 311.6 313.3 q0a3
+ -7 3 -6 3404.25 224.18 1610.00 41.75 538.5 226.7 q1a2
+ -7 11 -3 -38.96 145.11 173.00 60.16 648.8 279.8 q1a3
+ -7 13 -2 511.74 134.80 398.00 65.86 677.9 294.2 q1a3
+ -7 15 -1 167.50 165.61 194.00 73.50 707.1 308.7 q1a3
+ -7 31 10 496.38 188.57 225.00 78.62 1091.0 684.9 q2a7
+ -7 41 20 -127.28 89.23 86.00 44.48 903.6 572.5 q2a6
+ -7 45 25 47.84 100.46 175.00 40.96 813.7 542.9 q2a4
+ -6 -50 0 103.46 92.24 77.00 42.34 335.4 973.2 q0a11
+ -6 -48 -1 -13.99 87.67 77.00 42.39 346.5 932.3 q0a11
+ -6 -10 -8 4155.23 232.61 2253.00 63.98 265.0 345.1 q0a3
+ -6 30 10 824.94 277.22 468.00 93.06 1121.2 664.1 q2a7
+ -5 -9 -7 44.39 96.42 136.00 64.01 229.5 348.5 q0a3
+ -5 -3 -6 9530.21 324.50 5824.00 36.59 432.7 248.1 q1a2
+ -5 1 -5 333.36 106.91 166.00 37.24 488.3 272.5 q1a2
+ -5 7 -3 587.99 160.07 187.00 35.61 572.1 311.1 q1a2
+ -5 19 3 250.38 198.70 207.00 101.62 786.5 116.3 q2a0
+ -5 25 7 3555.27 304.80 1356.00 146.53 836.4 23.2 q2a0
+ -5 47 30 66.74 95.54 83.00 40.86 792.6 440.3 q2a4
+ -4 -36 -4 128.41 174.15 264.00 67.79 375.9 426.9 q0a5
+ -4 -32 -5 782.86 194.31 479.00 120.74 319.3 23.8 q0a1
+ -4 30 12 509.50 266.32 275.00 94.50 1145.7 601.7 q2a7
+ -3 -39 -2 -137.85 147.41 184.00 61.65 313.1 444.7 q0a5
+ -3 -27 -5 184.84 374.32 672.00 164.96 263.5 92.7 q0a1
+ -3 19 5 393.35 128.95 194.00 93.85 846.9 138.9 q2a0
+ -3 37 20 21.29 120.04 136.00 55.91 1030.9 517.8 q2a5
+ -2 -50 4 -4.34 69.72 64.00 37.54 93.2 426.7 q0a4
+ -2 -44 1 -113.61 115.95 108.00 51.01 210.5 454.3 q0a5
+ -2 -8 -4 3838.22 233.84 2503.00 51.98 137.7 330.5 q0a2
+ -2 44 30 290.05 92.95 82.00 40.55 898.9 379.4 q2a4
+ -1 -9 -3 1200.12 167.21 507.00 52.88 112.9 305.9 q0a2
+ -1 9 2 1345.50 146.88 486.00 49.50 833.1 276.6 q2a2
+ -1 45 33 85.64 108.17 110.00 31.76 1148.4 1001.3 q2a11
+ -1 47 36 68.29 84.38 86.00 32.91 1110.3 1050.7 q2a11
+ 0 -10 -2 4638.95 234.24 4520.00 52.45 88.2 281.3 q0a2
+ 0 6 2 6683.18 287.95 2043.00 56.42 843.1 329.3 q2a2
+ 0 32 19 -379.19 414.62 326.00 88.19 1155.6 476.3 q2a5
+ 0 34 21 97.41 187.94 206.00 69.79 1120.1 452.0 q2a5
+ 1 -13 -1 1653.11 157.85 926.00 46.49 73.2 228.3 q0a2
+ 1 27 16 594.41 207.43 557.00 132.79 1045.4 56.6 q2a1
+ 2 44 37 -109.50 87.25 73.00 37.50 1041.8 950.8 q2a11
+ 3 3 5 191.39 115.41 168.00 47.01 1184.0 303.3 q3a2
+ 3 23 16 1087.70 457.65 466.00 172.70 1074.5 140.3 q2a1
+ 4 -36 6 37.84 99.71 108.00 66.96 283.3 664.2 q0a7
+ 5 -37 8 -169.81 165.43 223.00 66.81 252.2 696.3 q0a7
+ 5 -11 5 4584.80 268.32 2674.00 63.80 1398.0 320.2 q3a3
+ 5 5 9 164.64 110.82 142.00 49.76 1177.2 223.4 q3a2
+ 5 27 23 -202.45 237.41 264.00 101.05 866.2 1464.3 q2a14
+ 6 -26 7 -116.12 538.52 402.00 156.12 1538.9 1410.9 q3a15
+ 6 10 13 -9.85 107.73 143.00 71.65 1065.5 335.8 q2a3
+ 6 12 14 2189.75 200.25 842.00 80.25 1081.2 307.2 q2a3
+ 6 32 30 -186.46 131.88 147.00 77.66 788.4 1359.4 q2a14
+ 7 21 22 -415.01 392.99 355.00 159.61 978.0 1453.2 q2a15
+ 8 -28 11 -233.89 252.01 304.00 107.49 1474.6 1352.5 q3a15
+ 8 -18 10 -508.06 654.61 540.00 193.06 1535.4 250.7 q3a3
+ 8 -16 10 1201.59 558.56 1240.00 139.21 1505.6 241.5 q3a3
+ 8 6 15 -97.96 153.84 185.00 107.16 1194.1 139.2 q3a0
+ 8 12 18 453.66 628.72 445.00 158.54 1155.4 327.5 q2a3
+ 9 -17 12 985.62 560.56 460.00 170.38 1533.1 209.3 q3a3
+ 9 -15 12 -301.20 471.14 466.00 143.80 1503.2 200.3 q3a3
+ 9 15 22 219.15 648.02 535.00 191.65 1088.7 1434.1 q2a15
+ 9 25 30 265.65 146.59 148.00 83.15 934.7 1322.3 q2a14
+ 10 -40 19 -256.45 115.30 86.00 41.05 1428.6 1133.3 q3a13
+ 10 16 25 -85.61 226.26 293.00 133.01 1083.5 1382.7 q2a15
+ 10 20 28 227.86 180.07 161.00 104.74 1021.7 1339.5 q2a15
+ 11 -37 20 -43.71 91.25 96.00 45.91 1380.7 1174.5 q3a13
+ 12 -24 19 -239.75 173.78 181.00 84.75 1306.2 1359.9 q3a14
+ 13 -31 23 -85.16 90.11 93.00 45.96 1282.2 1250.2 q3a12
+ 14 -32 26 -72.78 71.92 76.00 43.98 1237.3 1212.8 q3a12
+ 14 -22 24 -15.09 126.84 120.00 70.29 1210.1 1360.3 q3a14
+ 14 -12 24 50.76 160.44 212.00 117.64 1524.4 8.2 q3a1
+ 15 -29 28 87.81 128.15 116.00 45.19 1182.2 1248.6 q3a12
+ 15 -11 27 570.62 266.01 262.00 75.38 1538.0 405.7 q3a5
+ 15 5 32 -37.25 144.14 189.00 77.25 1425.4 617.5 q3a7
+ 16 -24 30 0.21 78.89 93.00 42.59 1389.4 756.5 q3a9
+ 16 -6 31 -228.60 202.18 256.00 68.40 1457.6 466.5 q3a5
+ 16 8 37 171.15 156.74 142.00 60.65 1343.6 650.7 q3a6
+ 17 -7 34 0.09 109.58 106.00 59.71 1410.0 435.1 q3a5
+ 18 -26 37 -5.75 96.59 85.00 41.75 1312.2 864.5 q3a8
+ 18 -2 39 -326.59 204.01 224.00 57.79 1317.8 496.1 q3a4
+ 18 6 43 -185.66 108.39 85.00 51.46 1241.0 593.6 q3a6
+ 19 -13 40 -116.62 102.98 108.00 45.62 1515.4 946.3 q3a11
+ 20 -30 46 -30.65 68.08 60.00 31.85 1174.7 971.4 q3a10
+ 20 -14 44 -61.99 78.42 107.00 43.39 1476.0 1011.4 q3a11
+ 20 -2 47 131.45 107.49 92.00 46.95 1179.6 460.7 q3a4
+ 21 -25 49 33.69 60.14 61.00 31.31 1246.3 1053.9 q3a10
+End of reflections
+--- End crystal
+----- End chunk -----
diff --git a/files/random-image b/files/random-image
new file mode 100755
index 0000000..f7a049b
--- /dev/null
+++ b/files/random-image
@@ -0,0 +1,16 @@
+#!/bin/bash
+
+FILE=$1
+ARGS=$2
+
+TEMPFILE=`mktemp $1.XXXXXX`
+
+trap "rm -f $TEMPFILE" EXIT
+sort -R $FILE > $TEMPFILE
+
+for FILENAME in `cat $TEMPFILE`; do
+
+ echo $FILENAME
+ hdfsee --int-boost=3 ${FILENAME} $ARGS
+
+done
generated by cgit v1.2.3 (git 2.25.1) at 2024-05-13 02:49:37 +0000