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stages:
- build
- test
- deploy
- build_container
build_dev_images:
stage: build
dependencies: []
only:
- master
image:
name: gcr.io/kaniko-project/executor:debug
entrypoint: [ "" ]
variables:
IMAGE_TAG_LATEST: "latest"
IMAGE_TAG_SHA: $CI_COMMIT_SHORT_SHA
DOCKER_HOST: tcp://docker:2375
DOCKER_TLS_CERTDIR: ""
script:
- echo "{\"auths\":{\"$CI_REGISTRY\":{\"username\":\"$CI_REGISTRY_USER\",\"password\":\"$CI_REGISTRY_PASSWORD\"}}}" > /kaniko/.docker/config.json
- >
/kaniko/executor
--context $CI_PROJECT_DIR
--dockerfile $CI_PROJECT_DIR/Dockerfile_$IMAGE
--destination $CI_REGISTRY_IMAGE/$IMAGE:$IMAGE_TAG_LATEST
--destination $CI_REGISTRY_IMAGE/$IMAGE:$IMAGE_TAG_SHA
--build-arg HELM_VERSION=$HELM_VERSION
--build-arg RANCHER_CLI_VERSION=$RANCHER_CLI_VERSION
tags:
- kubernetes
parallel:
matrix:
- IMAGE: ["centos7","alma9","fedora","ubuntu"]
when: manual
build-and-test:
image: $CI_REGISTRY_IMAGE/$PLATFORM
variables:
GIT_STRATEGY: clone
script:
- meson setup build --prefix $CFPREFIX
- ninja -v -C build
- ninja -v -C build test
- ninja -C build install
# Tweak CrystFEL GUI so that it can find syminfo.lib
- mv $CFPREFIX/bin/crystfel $CFPREFIX/bin/crystfel.real
- echo '#!/bin/sh' > $CFPREFIX/bin/crystfel
- echo "export SYMINFO=$CFPREFIX/share/ccp4/syminfo.lib" >> $CFPREFIX/bin/crystfel
- echo "$CFPREFIX/bin/crystfel.real \$@" >> $CFPREFIX/bin/crystfel
- chmod +x $CFPREFIX/bin/crystfel
# Tweak get_hkl in the same way
- mv $CFPREFIX/bin/get_hkl $CFPREFIX/bin/get_hkl.real
- echo '#!/bin/sh' > $CFPREFIX/bin/get_hkl
- echo "export SYMINFO=$CFPREFIX/share/ccp4/syminfo.lib" >> $CFPREFIX/bin/get_hkl
- echo "$CFPREFIX/bin/get_hkl.real \$@" >> $CFPREFIX/bin/get_hkl
- chmod +x $CFPREFIX/bin/get_hkl
# Mosflm (tweaked to find syminfo.lib and not load environ.def/default.def)
- wget -nv https://www.mrc-lmb.cam.ac.uk/mosflm/mosflm/ver740/pre-built/mosflm-linux-64-noX11.zip
- unzip mosflm-linux-64-noX11.zip
- mv mosflm-linux-64-noX11 $CFPREFIX/bin/mosflm.real
- echo '#!/bin/sh' > $CFPREFIX/bin/mosflm
- echo "export SYMINFO=$CFPREFIX/share/ccp4/syminfo.lib" >> $CFPREFIX/bin/mosflm
- echo "$CFPREFIX/bin/mosflm.real -n \$@" >> $CFPREFIX/bin/mosflm
- chmod +x $CFPREFIX/bin/mosflm
- cp -Rp /software $CI_PROJECT_DIR/$PLATFORM
artifacts:
paths:
- $PLATFORM
- build/meson-logs/testlog.junit.xml
reports:
junit: build/meson-logs/testlog.junit.xml
when: on_success
expire_in: 1 day
parallel:
matrix:
- PLATFORM: ["centos7","alma9","fedora","ubuntu"]
build-and-test-minimal:
image: $IMAGE:latest
script:
- dnf update -y && dnf group install -y development-tools &&
dnf install -y gsl-devel flex bison cmake meson
- meson setup build -Dhdf5=disabled --wrap-mode=nofallback && ninja -C build && ninja -C build test
artifacts:
when: always
paths:
- build/meson-logs/testlog.junit.xml
reports:
junit: build/meson-logs/testlog.junit.xml
parallel:
matrix:
- IMAGE: ["fedora"]
build-brew-macos:
dependencies: []
tags:
- macOS
variables:
GIT_STRATEGY: clone
script:
- brew update
- brew upgrade -f
- brew uninstall -v -f crystfel
- brew install -v -s ./crystfel.rb --HEAD
- brew test crystfel
- brew uninstall -v -f crystfel
rules:
- if: $CI_COMMIT_BRANCH == "master"
deploy-remote-maxwell:
stage: deploy
image: $CI_REGISTRY_IMAGE/alma9
dependencies:
- build-and-test
variables:
GIT_STRATEGY: none
tags:
- DESY-intern
before_script:
##
## Run ssh-agent (inside the build environment)
## Give the right permissions, otherwise ssh-add will refuse to add files
## Add the SSH key stored in MAXWELL_SSH_PRIVATE_KEY file type CI/CD variable to the agent store
## Create the SSH directory and give it the right permissions
## If MAXWELL_SSH_PRIVATE_KEY is not set then use $MAXWELL_USER_NAME and $MAXWELL_ACCOUNT_PASSWORD
## to connect using Kerberos.
- HOST="max-wgs";
- PREFIX="alma9";
- if [ $MAXWELL_SSH_PRIVATE_KEY ]; then
eval $(ssh-agent -s);
chmod 400 "$MAXWELL_SSH_PRIVATE_KEY";
ssh-add "$MAXWELL_SSH_PRIVATE_KEY";
else
echo $MAXWELL_ACCOUNT_PASSWORD | kinit $MAXWELL_USER_NAME@DESY.DE;
fi
script:
- ssh $MAXWELL_USER_NAME@$HOST
"if [ -d /software/crystfel/devel ]; then
mv -f /software/crystfel/devel /software/crystfel/devel-`date +%F-%H:%M:%S`;
else if [ ! -d /software/crystfel/ ]; then
mkdir -p /software/crystfel/;
fi;
fi"
- scp -r $PREFIX/crystfel/devel $MAXWELL_USER_NAME@$HOST:/software/crystfel/
rules:
- if: $CI_COMMIT_BRANCH == "master"
build_container_image:
stage: build_container
dependencies: []
only:
- master
image:
name: gcr.io/kaniko-project/executor:debug
entrypoint: [ "" ]
variables:
IMAGE: "crystfel"
IMAGE_TAG_LATEST: "latest"
IMAGE_TAG_SHA: $CI_COMMIT_SHORT_SHA
DOCKER_HOST: tcp://docker:2375
DOCKER_TLS_CERTDIR: ""
script:
- echo "{\"auths\":{\"$CI_REGISTRY\":{\"username\":\"$CI_REGISTRY_USER\",\"password\":\"$CI_REGISTRY_PASSWORD\"}}}" > /kaniko/.docker/config.json
- >
/kaniko/executor
--context $CI_PROJECT_DIR
--dockerfile $CI_PROJECT_DIR/Dockerfile
--destination $CI_REGISTRY_IMAGE/$IMAGE:$IMAGE_TAG_LATEST
--destination $CI_REGISTRY_IMAGE/$IMAGE:$IMAGE_TAG_SHA
--build-arg HELM_VERSION=$HELM_VERSION
--build-arg RANCHER_CLI_VERSION=$RANCHER_CLI_VERSION
tags:
- kubernetes
when: manual
build_container_image_tag:
stage: build_container
image:
name: gcr.io/kaniko-project/executor:debug
entrypoint: [ "" ]
variables:
IMAGE: "crystfel"
IMAGE_TAG_VER: $CI_COMMIT_TAG
DOCKER_HOST: tcp://docker:2375
DOCKER_TLS_CERTDIR: ""
script:
- echo "{\"auths\":{\"$CI_REGISTRY\":{\"username\":\"$CI_REGISTRY_USER\",\"password\":\"$CI_REGISTRY_PASSWORD\"}}}" > /kaniko/.docker/config.json
- >
/kaniko/executor
--context $CI_PROJECT_DIR
--dockerfile $CI_PROJECT_DIR/Dockerfile
--destination $CI_REGISTRY_IMAGE/$IMAGE:$IMAGE_TAG_VER
--build-arg HELM_VERSION=$HELM_VERSION
--build-arg RANCHER_CLI_VERSION=$RANCHER_CLI_VERSION
tags:
- kubernetes
rules:
- if: $CI_COMMIT_TAG
when: manual
|
