blob: c11f521ebdd5ed68d21d506a1274d617af36ac8c (
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#!/bin/sh
RUN=$1
NOSAMPLE=`echo $RUN | sed -e 's/\-.*$//'`
GEOM=<name of geometry file>
find <path to CXI files>/$RUN -name '*.cxi' > files-${RUN}.lst
list_events -i files-${RUN}.lst -g $GEOM -o events-${RUN}.lst
wc -l events-${RUN}.lst
rm -f split-events-${RUN}.lst files-${RUN}.lst
split -d -l 500 events-${RUN}.lst split-events-${RUN}.lst
rm -f events-${RUN}.lst
for FILE in split-events-${RUN}.lst*; do
STREAM=`echo $FILE | sed -e "s/split-events-${RUN}.lst/${RUN}.stream/"`
NAME=`echo $FILE | sed -e "s/split-events-${RUN}.lst/${NOSAMPLE}-/"`
echo "$NAME: $FILE ---> $STREAM"
bsub -q psanaq -o $NAME.log -J $NAME -n 12 -R "span[hosts=1]" \
indexamajig \
-i $FILE -o $STREAM -j 32 -g $GEOM --peaks=cxi
done
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