Added iterative peaksearch method

git-svn-id: svn://cook.msm.cam.ac.uk:745/diff-tomo/dtr@3 bf6ca9ba-c028-0410-8290-897cf20841d1

1 files changed, 69 insertions, 57 deletions

diff --git a/Makefile.in b/Makefile.in
index 7b89116..70e91b0 100644
--- a/Makefile.in
+++ b/Makefile.in
@@ -1,8 +1,8 @@
-# Makefile.in generated by automake 1.9.6 from Makefile.am.
+# Makefile.in generated by automake 1.10 from Makefile.am.
 # @configure_input@
 
 # Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005  Free Software Foundation, Inc.
+# 2003, 2004, 2005, 2006  Free Software Foundation, Inc.
 # This Makefile.in is free software; the Free Software Foundation
 # gives unlimited permission to copy and/or distribute it,
 # with or without modifications, as long as this notice is preserved.
@@ -13,15 +13,11 @@
 # PARTICULAR PURPOSE.
 
 @SET_MAKE@
-srcdir = @srcdir@
-top_srcdir = @top_srcdir@
 VPATH = @srcdir@
 pkgdatadir = $(datadir)/@PACKAGE@
 pkglibdir = $(libdir)/@PACKAGE@
 pkgincludedir = $(includedir)/@PACKAGE@
-top_builddir = .
 am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd
-INSTALL = @INSTALL@
 install_sh_DATA = $(install_sh) -c -m 644
 install_sh_PROGRAM = $(install_sh) -c
 install_sh_SCRIPT = $(install_sh) -c
@@ -43,7 +39,7 @@ am__aclocal_m4_deps = $(top_srcdir)/configure.ac
 am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
 	$(ACLOCAL_M4)
 am__CONFIG_DISTCLEAN_FILES = config.status config.cache config.log \
- configure.lineno configure.status.lineno
+ configure.lineno config.status.lineno
 mkinstalldirs = $(install_sh) -d
 CONFIG_HEADER = config.h
 CONFIG_CLEAN_FILES =
@@ -51,10 +47,13 @@ SOURCES =
 DIST_SOURCES =
 RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \
 	html-recursive info-recursive install-data-recursive \
-	install-exec-recursive install-info-recursive \
-	install-recursive installcheck-recursive installdirs-recursive \
-	pdf-recursive ps-recursive uninstall-info-recursive \
-	uninstall-recursive
+	install-dvi-recursive install-exec-recursive \
+	install-html-recursive install-info-recursive \
+	install-pdf-recursive install-ps-recursive install-recursive \
+	installcheck-recursive installdirs-recursive pdf-recursive \
+	ps-recursive uninstall-recursive
+RECURSIVE_CLEAN_TARGETS = mostlyclean-recursive clean-recursive	\
+  distclean-recursive maintainer-clean-recursive
 ETAGS = etags
 CTAGS = ctags
 DIST_SUBDIRS = $(SUBDIRS)
@@ -70,8 +69,6 @@ GZIP_ENV = --best
 distuninstallcheck_listfiles = find . -type f -print
 distcleancheck_listfiles = find . -type f -print
 ACLOCAL = @ACLOCAL@
-AMDEP_FALSE = @AMDEP_FALSE@
-AMDEP_TRUE = @AMDEP_TRUE@
 AMTAR = @AMTAR@
 AUTOCONF = @AUTOCONF@
 AUTOHEADER = @AUTOHEADER@
@@ -95,6 +92,7 @@ GTKGLEXT_CFLAGS = @GTKGLEXT_CFLAGS@
 GTKGLEXT_LIBS = @GTKGLEXT_LIBS@
 GTK_CFLAGS = @GTK_CFLAGS@
 GTK_LIBS = @GTK_LIBS@
+INSTALL = @INSTALL@
 INSTALL_DATA = @INSTALL_DATA@
 INSTALL_PROGRAM = @INSTALL_PROGRAM@
 INSTALL_SCRIPT = @INSTALL_SCRIPT@
@@ -105,6 +103,7 @@ LIBS = @LIBS@
 LN_S = @LN_S@
 LTLIBOBJS = @LTLIBOBJS@
 MAKEINFO = @MAKEINFO@
+MKDIR_P = @MKDIR_P@
 OBJEXT = @OBJEXT@
 PACKAGE = @PACKAGE@
 PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@
@@ -118,9 +117,11 @@ SET_MAKE = @SET_MAKE@
 SHELL = @SHELL@
 STRIP = @STRIP@
 VERSION = @VERSION@
+abs_builddir = @abs_builddir@
+abs_srcdir = @abs_srcdir@
+abs_top_builddir = @abs_top_builddir@
+abs_top_srcdir = @abs_top_srcdir@
 ac_ct_CC = @ac_ct_CC@
-am__fastdepCC_FALSE = @am__fastdepCC_FALSE@
-am__fastdepCC_TRUE = @am__fastdepCC_TRUE@
 am__include = @am__include@
 am__leading_dot = @am__leading_dot@
 am__quote = @am__quote@
@@ -128,6 +129,7 @@ am__tar = @am__tar@
 am__untar = @am__untar@
 bindir = @bindir@
 build_alias = @build_alias@
+builddir = @builddir@
 datadir = @datadir@
 datarootdir = @datarootdir@
 docdir = @docdir@
@@ -151,9 +153,12 @@ program_transform_name = @program_transform_name@
 psdir = @psdir@
 sbindir = @sbindir@
 sharedstatedir = @sharedstatedir@
+srcdir = @srcdir@
 sysconfdir = @sysconfdir@
 target_alias = @target_alias@
-EXTRA_DIST = configure src/displaywindow.h src/trackball.h src/reflections.h src/control.h src/readpng.h src/mrc.h src/imagedisplay.h src/main.h data/displaywindow.ui \
+top_builddir = @top_builddir@
+top_srcdir = @top_srcdir@
+EXTRA_DIST = configure src/displaywindow.h src/trackball.h src/reflections.h src/control.h src/readpng.h src/mrc.h src/imagedisplay.h src/main.h data/displaywindow.ui src/peakdetect.h \
 		src/utils.h src/itrans.h src/qdrp.h src/ipr.h
 
 SUBDIRS = src data
@@ -198,7 +203,7 @@ $(ACLOCAL_M4):  $(am__aclocal_m4_deps)
 config.h: stamp-h1
 	@if test ! -f $@; then \
 	  rm -f stamp-h1; \
-	  $(MAKE) stamp-h1; \
+	  $(MAKE) $(AM_MAKEFLAGS) stamp-h1; \
 	else :; fi
 
 stamp-h1: $(srcdir)/config.h.in $(top_builddir)/config.status
@@ -211,7 +216,6 @@ $(srcdir)/config.h.in:  $(am__configure_deps)
 
 distclean-hdr:
 	-rm -f config.h stamp-h1
-uninstall-info-am:
 
 # This directory's subdirectories are mostly independent; you can cd
 # into them and run `make' without going through this Makefile.
@@ -244,8 +248,7 @@ $(RECURSIVE_TARGETS):
 	  $(MAKE) $(AM_MAKEFLAGS) "$$target-am" || exit 1; \
 	fi; test -z "$$fail"
 
-mostlyclean-recursive clean-recursive distclean-recursive \
-maintainer-clean-recursive:
+$(RECURSIVE_CLEAN_TARGETS):
 	@failcom='exit 1'; \
 	for f in x $$MAKEFLAGS; do \
 	  case $$f in \
@@ -347,24 +350,22 @@ distclean-tags:
 
 distdir: $(DISTFILES)
 	$(am__remove_distdir)
-	mkdir $(distdir)
-	$(mkdir_p) $(distdir)/data $(distdir)/src
-	@srcdirstrip=`echo "$(srcdir)" | sed 's|.|.|g'`; \
-	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's|.|.|g'`; \
-	list='$(DISTFILES)'; for file in $$list; do \
-	  case $$file in \
-	    $(srcdir)/*) file=`echo "$$file" | sed "s|^$$srcdirstrip/||"`;; \
-	    $(top_srcdir)/*) file=`echo "$$file" | sed "s|^$$topsrcdirstrip/|$(top_builddir)/|"`;; \
-	  esac; \
+	test -d $(distdir) || mkdir $(distdir)
+	@srcdirstrip=`echo "$(srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+	topsrcdirstrip=`echo "$(top_srcdir)" | sed 's/[].[^$$\\*]/\\\\&/g'`; \
+	list='$(DISTFILES)'; \
+	  dist_files=`for file in $$list; do echo $$file; done | \
+	  sed -e "s|^$$srcdirstrip/||;t" \
+	      -e "s|^$$topsrcdirstrip/|$(top_builddir)/|;t"`; \
+	case $$dist_files in \
+	  */*) $(MKDIR_P) `echo "$$dist_files" | \
+			   sed '/\//!d;s|^|$(distdir)/|;s,/[^/]*$$,,' | \
+			   sort -u` ;; \
+	esac; \
+	for file in $$dist_files; do \
 	  if test -f $$file || test -d $$file; then d=.; else d=$(srcdir); fi; \
-	  dir=`echo "$$file" | sed -e 's,/[^/]*$$,,'`; \
-	  if test "$$dir" != "$$file" && test "$$dir" != "."; then \
-	    dir="/$$dir"; \
-	    $(mkdir_p) "$(distdir)$$dir"; \
-	  else \
-	    dir=''; \
-	  fi; \
 	  if test -d $$d/$$file; then \
+	    dir=`echo "/$$file" | sed -e 's,/[^/]*$$,,'`; \
 	    if test -d $(srcdir)/$$file && test $$d != $(srcdir); then \
 	      cp -pR $(srcdir)/$$file $(distdir)$$dir || exit 1; \
 	    fi; \
@@ -378,7 +379,7 @@ distdir: $(DISTFILES)
 	list='$(DIST_SUBDIRS)'; for subdir in $$list; do \
 	  if test "$$subdir" = .; then :; else \
 	    test -d "$(distdir)/$$subdir" \
-	    || $(mkdir_p) "$(distdir)/$$subdir" \
+	    || $(MKDIR_P) "$(distdir)/$$subdir" \
 	    || exit 1; \
 	    distdir=`$(am__cd) $(distdir) && pwd`; \
 	    top_distdir=`$(am__cd) $(top_distdir) && pwd`; \
@@ -386,6 +387,8 @@ distdir: $(DISTFILES)
 	      $(MAKE) $(AM_MAKEFLAGS) \
 	        top_distdir="$$top_distdir" \
 	        distdir="$$distdir/$$subdir" \
+		am__remove_distdir=: \
+		am__skip_length_check=: \
 	        distdir) \
 	      || exit 1; \
 	  fi; \
@@ -393,7 +396,7 @@ distdir: $(DISTFILES)
 	-find $(distdir) -type d ! -perm -777 -exec chmod a+rwx {} \; -o \
 	  ! -type d ! -perm -444 -links 1 -exec chmod a+r {} \; -o \
 	  ! -type d ! -perm -400 -exec chmod a+r {} \; -o \
-	  ! -type d ! -perm -444 -exec $(SHELL) $(install_sh) -c -m a+r {} {} \; \
+	  ! -type d ! -perm -444 -exec $(install_sh) -c -m a+r {} {} \; \
 	|| chmod -R a+r $(distdir)
 dist-gzip: distdir
 	tardir=$(distdir) && $(am__tar) | GZIP=$(GZIP_ENV) gzip -c >$(distdir).tar.gz
@@ -468,7 +471,7 @@ distcheck: dist
 	$(am__remove_distdir)
 	@(echo "$(distdir) archives ready for distribution: "; \
 	  list='$(DIST_ARCHIVES)'; for i in $$list; do echo $$i; done) | \
-	  sed -e '1{h;s/./=/g;p;x;}' -e '$${p;x;}'
+	  sed -e 1h -e 1s/./=/g -e 1p -e 1x -e '$$p' -e '$$x'
 distuninstallcheck:
 	@cd $(distuninstallcheck_dir) \
 	&& test `$(distuninstallcheck_listfiles) | wc -l` -le 1 \
@@ -537,12 +540,20 @@ info-am:
 
 install-data-am:
 
+install-dvi: install-dvi-recursive
+
 install-exec-am:
 
+install-html: install-html-recursive
+
 install-info: install-info-recursive
 
 install-man:
 
+install-pdf: install-pdf-recursive
+
+install-ps: install-ps-recursive
+
 installcheck-am:
 
 maintainer-clean: maintainer-clean-recursive
@@ -563,24 +574,25 @@ ps: ps-recursive
 
 ps-am:
 
-uninstall-am: uninstall-info-am
-
-uninstall-info: uninstall-info-recursive
-
-.PHONY: $(RECURSIVE_TARGETS) CTAGS GTAGS all all-am am--refresh check \
-	check-am clean clean-generic clean-recursive ctags \
-	ctags-recursive dist dist-all dist-bzip2 dist-gzip dist-shar \
-	dist-tarZ dist-zip distcheck distclean distclean-generic \
-	distclean-hdr distclean-recursive distclean-tags \
-	distcleancheck distdir distuninstallcheck dvi dvi-am html \
-	html-am info info-am install install-am install-data \
-	install-data-am install-exec install-exec-am install-info \
-	install-info-am install-man install-strip installcheck \
-	installcheck-am installdirs installdirs-am maintainer-clean \
-	maintainer-clean-generic maintainer-clean-recursive \
-	mostlyclean mostlyclean-generic mostlyclean-recursive pdf \
-	pdf-am ps ps-am tags tags-recursive uninstall uninstall-am \
-	uninstall-info-am
+uninstall-am:
+
+.MAKE: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) install-am \
+	install-strip
+
+.PHONY: $(RECURSIVE_CLEAN_TARGETS) $(RECURSIVE_TARGETS) CTAGS GTAGS \
+	all all-am am--refresh check check-am clean clean-generic \
+	ctags ctags-recursive dist dist-all dist-bzip2 dist-gzip \
+	dist-shar dist-tarZ dist-zip distcheck distclean \
+	distclean-generic distclean-hdr distclean-tags distcleancheck \
+	distdir distuninstallcheck dvi dvi-am html html-am info \
+	info-am install install-am install-data install-data-am \
+	install-dvi install-dvi-am install-exec install-exec-am \
+	install-html install-html-am install-info install-info-am \
+	install-man install-pdf install-pdf-am install-ps \
+	install-ps-am install-strip installcheck installcheck-am \
+	installdirs installdirs-am maintainer-clean \
+	maintainer-clean-generic mostlyclean mostlyclean-generic pdf \
+	pdf-am ps ps-am tags tags-recursive uninstall uninstall-am
 
 # Tell versions [3.59,3.63) of GNU make to not export all variables.
 # Otherwise a system limit (for SysV at least) may be exceeded.