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-rw-r--r--doc/man/indexamajig.14
-rw-r--r--libcrystfel/src/image.h8
2 files changed, 5 insertions, 7 deletions
diff --git a/doc/man/indexamajig.1 b/doc/man/indexamajig.1
index 64b22025..25065aed 100644
--- a/doc/man/indexamajig.1
+++ b/doc/man/indexamajig.1
@@ -80,6 +80,10 @@ The Felix indexer has been developed by Soeren Schmidt <ssch@fysik.dtu.dk>. To u
.PD
Invoke XDS, and use its REFIDX procedure to attempt to index the pattern.
+.IP \fBtaketwo\fR
+.PD
+Use the TakeTwo algorithm. See Ginn et al., Acta Cryst. (2016). D72, 956-965.
+
.PP
You can add one or more of the following to the above indexing methods:
diff --git a/libcrystfel/src/image.h b/libcrystfel/src/image.h
index 9719bb59..d7884e4c 100644
--- a/libcrystfel/src/image.h
+++ b/libcrystfel/src/image.h
@@ -173,13 +173,7 @@ struct beam_params
* The field <structfield>data</structfield> contains the raw image data, if it
* is currently available. The data might be available throughout the
* processing of an experimental pattern, but it might not be available when
- * simulating, scaling or merging patterns. Similarly,
- * <structfield>flags</structfield> contains an array of the same dimensions
- * as <structfield>data</structfield> to contain the bad pixel flags.
- * <structfield>twotheta</structfield> likewise contains an array of 2*theta
- * (scattering angle) values in radians, since these values are generated as a
- * by-product of the scattering vector calculation and can be used later for
- * calculating intensities from differential scattering cross sections.
+ * simulating, scaling or merging patterns.
*
* <structfield>crystals</structfield> is an array of %Crystal directly
* returned by the low-level indexing system. <structfield>n_crystals</structfield>