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| author | Thomas White <taw@physics.org> | 2017-07-24 14:58:50 +0200 |
|---|---|---|
| committer | Thomas White <taw@physics.org> | 2017-07-24 14:58:58 +0200 |
| commit | 6a25a919a8a886f446089bd67e26132dbf46627e (patch) | |
| tree | 571354a7802bf31c9a27b26fc692a015114d8407 | |
| parent | c9dee7dba94cdd314d2769d30695d995d491b9cb (diff) | |
Update docs
| -rw-r--r-- | doc/man/indexamajig.1 | 4 | ||||
| -rw-r--r-- | libcrystfel/src/image.h | 8 |
2 files changed, 5 insertions, 7 deletions
diff --git a/doc/man/indexamajig.1 b/doc/man/indexamajig.1 index 64b22025..25065aed 100644 --- a/doc/man/indexamajig.1 +++ b/doc/man/indexamajig.1 @@ -80,6 +80,10 @@ The Felix indexer has been developed by Soeren Schmidt <ssch@fysik.dtu.dk>. To u .PD Invoke XDS, and use its REFIDX procedure to attempt to index the pattern. +.IP \fBtaketwo\fR +.PD +Use the TakeTwo algorithm. See Ginn et al., Acta Cryst. (2016). D72, 956-965. + .PP You can add one or more of the following to the above indexing methods: diff --git a/libcrystfel/src/image.h b/libcrystfel/src/image.h index 9719bb59..d7884e4c 100644 --- a/libcrystfel/src/image.h +++ b/libcrystfel/src/image.h @@ -173,13 +173,7 @@ struct beam_params * The field <structfield>data</structfield> contains the raw image data, if it * is currently available. The data might be available throughout the * processing of an experimental pattern, but it might not be available when - * simulating, scaling or merging patterns. Similarly, - * <structfield>flags</structfield> contains an array of the same dimensions - * as <structfield>data</structfield> to contain the bad pixel flags. - * <structfield>twotheta</structfield> likewise contains an array of 2*theta - * (scattering angle) values in radians, since these values are generated as a - * by-product of the scattering vector calculation and can be used later for - * calculating intensities from differential scattering cross sections. + * simulating, scaling or merging patterns. * * <structfield>crystals</structfield> is an array of %Crystal directly * returned by the low-level indexing system. <structfield>n_crystals</structfield> |